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Hinge Region Regulates Its Transcriptional Activity
Institut National de la Santé et de la Recherche Médicale, Unité 590, Centre Léon Bérard, 69373 Lyon Cedex 08, France
Address all correspondence and requests for reprints to: Laura Corbo, Unité Institut National de la Santé et de la Recherche Médicale, Unité 590, Centre Léon Bérard, 28 Rue Laennec, 69373 Lyon Cedex 08, France. E-mail: corbo{at}lyon.fnclcc.fr.
| ABSTRACT |
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(ER
). ER
is a nuclear transcription factor undergoing different types of posttranslational modifications, i.e. phosphorylation, acetylation, and ubiquitination, which regulate its transcriptional activation and/or stability. Here we identify ER
as a new target for small ubiquitin-like modifier (SUMO)-1 modification in intact cells and in vitro. Moreover, ER
sumoylation occurs strictly in the presence of hormone. SUMO-1 appears to regulate ER
-dependent transcription. Using a series of mutants, we demonstrated that ER
is sumoylated at conserved lysine residues within the hinge region. Mutations that prevented SUMO modification impaired ER
-induced transcription without influencing ER
cellular localization. In addition to identifying protein inhibitor of activated signal transducer and activator of transcription (PIAS)1 and PIAS3 as E3 ligases for ER
, we also found that PIAS1 and PIAS3, as well as Ubc9, modulated ER
-dependent transcription independently from their SUMO-1 conjugation activity. These findings identify sumoylation as a new mechanism modulating ER
-dependent cellular response and provide a link between the SUMO and estrogen pathways. | INTRODUCTION |
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(ER
) is a member of a large conserved superfamily of steroid hormone nuclear receptors acting as ligand-regulated transcription factors (1, 2). ER
regulates many physiological pathways in response to its natural ligand, 17ß-estradiol (E2). Hormone binding induces conformational changes that create a new interface for the recruitment of transcriptional auxiliary factors, the binding of ER
to estrogen response element (ERE) in gene promoters, and the regulation of the transcriptional activity of genes involved in proliferation, development, and differentiation. The cofactors bind directly to receptors and generally function as components of large, multimolecular complexes that mediate transcriptional activation or repression by recruiting the transcriptional machinery to the promoter or by remodeling chromatin, as well as exercising their own enzymatic activities, such as histone acetyltransferases and deacetylase, ATPase, protease, kinase, ubiquitin ligase, and histone methyl transferases (3, 4, 5, 6, 7). Moreover, different types of posttranslational modifications, namely phosphorylation, acetylation, and ubiquitination, also regulate the transcriptional activation and/or stability of nuclear receptors (8, 9).
Recently, a new covalent modification of proteins, especially of transcriptional regulators, has been described: SUMO (small ubiquitin-like modifier) modification. This is a covalent modification leading to the attachment of SUMO to specific lysine residues of target proteins, mainly nuclear proteins. SUMO represents a class of ubiquitin-like proteins conjugated, like ubiquitin, by a set of enzymes to cellular proteins. Even if mechanistically similar to ubiquitination, sumoylation does not promote protein degradation and the two processes involve distinct enzymes. Protein sumoylation involves SAE1/SAE2 heterodimer acting as E1 enzyme in mammals (Aos1/Uba2 in yeast) and Ubc9 acting as E2 SUMO-conjugating enzyme (10, 11, 12, 13). In ubiquitination, E3 ubiquitin ligases, which promote ubiquitin transfer from E2 enzyme to the target lysine, are responsible for substrate specificity (14). Although target specificity remains unclear in the SUMO modification pathway, proteins of the mammalian protein inhibitor of activated signal transducer and activator of transcription (PIAS) family, Ran BP2 and the polycomb PC2 repressor, have recently been shown to function as E3-type SUMO ligases (15, 16, 17, 18, 19). The analysis of many SUMO substrates indicates that SUMO modification occurs at a particular sequence,
KxE [where
represents L, I, V, or F, and x is any amino acid (aa)]; thus, specificity of SUMO conjugation might be conferred by recognition of this sequence by the thioester-linked Ubc9-SUMO conjugate. SUMO modification appears to regulate diverse cellular processes, including nuclear transport, signal transduction, apoptosis, autophagy, cell cycle control, ubiquitin-dependent degradation, as well as gene transcription (reviewed in Refs.20, 21, 22, 23). Interestingly, several studies have reported that SUMO-1 regulates the hormone-induced transactivation of some nuclear receptors. This regulation can be achieved by sumoylation of either receptors or coregulators (24, 25, 26, 27), identifying sumoylation as an integral part of nuclear hormone receptor functions. In particular, a recent report indicated that ER
-mediated transcription is stimulated by SUMO-1 expression (28). Although it has been speculated that the enhancement of ER
transcription by SUMO-1 may be realized by the sumoylation of the coactivator steroid receptor coactivator 1, the molecular basis by which SUMO-1 regulates ER
transcriptional capacity remains to be determined.
In this study, we show, for the first time, that the hinge region of ER
is a specific target of SUMO-1, and that PIAS1 and PIAS3 proteins act as SUMO-E3 ligases for this receptor. These effects occur strictly in the presence of hormone and affect the transcriptional properties of ER
. We propose that ER
sumoylation is viewed as a new mechanism modulating ER-mediated processes in both normal and cancer cells.
| RESULTS |
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Is Modified by SUMO-1 in Vivo
undergoes sumoylation, we analyzed COS-7 cells that were transiently transfected with constructs encoding ER
and His-tagged SUMO-1. Transfected cells were lysed in the presence of N-ethylmaleimide (NEM), an inhibitor of SUMO-1 hydrolase, and transfection efficiency was evaluated by Western immunoblotting of total cellular proteins. As shown in Fig. 1A
antibody detected a major band of approximately 66 kDa (marked with an arrowhead) corresponding to ER
and two slow-migrating forms of ER
in the presence of SUMO-1 (marked with a star). ER
was then immunoprecipitated from these extracts and analyzed by Western immunoblotting with anti-SUMO1 and anti-ER
antibodies. Figure 1B
and SUMO-1-encoding constructs. Anti-ER
monoclonal antibody was used to confirm that a similar amount of ER
was expressed in and immunoprecipitated from COS-7 transfected cells. Anti-ER
antibody also detected two slower ER
forms that comigrated with the two bands recognized by anti-SUMO-1 (Fig. 1B
alone. To unambiguously establish that the high molecular weight bands corresponded to sumoylated ER
, we transfected COS-7 cells as described above, and then lysed them under denaturing conditions to protect sumoylated proteins from isopeptidases. We next purified the His-tagged proteins by chromatography on nickel-charged agarose beads [Ni-nitrilotriacetic acid (NTA)] and analyzed them by Western blotting using an anti-ER
monoclonal antibody (Fig. 1C
, probably retained on Ni-NTA beads by the zinc finger motifs. When ER
was coexpressed with SUMO-1, two slower-migrating forms of ER
(marked with a star), absent in control cells, were revealed (Fig. 1C
originate from covalent linking to SUMO-1. We then tested whether the expression of Ubc9, the E2 SUMO-conjugating enzyme, affected the sumoylation of ER
. COS-7 cells were transiently transfected with expression plasmids for ER
, His6-SUMO-1, and Ubc9. His-tagged proteins purified by chromatography on nickel-charged resin were subjected to immunoblotting with anti-ER
. As shown in Fig. 1D
sumoylation when Ubc9 was expressed in the presence of SUMO-1. To further support that Ubc9 directly affected the SUMO modification of ER
, we expressed under the same conditions the catalytically inactive form of Ubc9, Ubc9/C93S, with SUMO-1. Western blot analysis indicated that Ubc9/C93S expression resulted in a significant reduction of the SUMO-modified ER
(Fig. 1D
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is a new target for SUMO-1 modification in vivo.
Mapping of Sumoylation Regions in ER
Because ER
lacks the described SUMO-1 acceptor consensus sequences, we have so far been unable to predict the modified lysines among the 28 ones present in ER
protein. To address this issue, we constructed deletion mutants containing different regions of ER
fused to the transactivation domain of VP16 (see Fig. 2A
). The VP16-fused mutants were expressed in COS-7 cells with His6-SUMO-1, and their sumoylation state was examined by chromatography on nickel-charged agarose beads and analyzed by Western blotting. As shown in Fig. 2B
, only the mutant ER2 (aa 176302) was strongly postmodified in this assay. Two slower migrating bands in the range of approximately 50 and 70 kDa were detected by anti-ER
only in the presence of SUMO-1 (Fig. 2B
). Because SUMO-1 migrates at about 20 kDa, these bands represent the addition of one to two SUMO molecules to VP16-ER2 (
32 kDa apparent molecular mass). The two ER
regions, ER1 (aa 1180) encompassing the activation function (AF)1 region, and ER3 (aa 297595) containing the ligand-binding domain and the AF2 region, were not affected by cotransfection with SUMO-1 (Fig. 2B
). The mutant ER2 contains the DNA-binding domain (DBD) consisting of two zinc finger motifs that, through the so-called P box, is responsible for ER binding to EREs and, in combination with a D box, controls the dimerization of ER
on EREs. The D domain, also called the hinge region, is implicated in coregulatory protein binding. Our results clearly indicate that ER
sumoylation sites are located in the central region of the receptor (residues 176302) (see Fig. 2B
). To confirm these results in vitro, we used the same ER
mutants fused to glutathione S-transferase (GST). Purified GST-tagged mutants were incubated with purified recombinant components required for SUMO-1 modification in vitro. Control reactions were also performed in the absence of substrate, ATP, and GST-SUMO-1, conditions that do not support SUMO modification. Under these conditions, a more slowly migrating band of approximately 80 kDa, marked with a star, was observed only for GST-ER2 incubated in the presence of GST-SUMO-1 and ATP (Fig. 2C
). This band was absent in both control assays without ATP or SUMO-1. This finding is consistent with the predicted size of GST-ER2 (
40 kDa) modified by a single molecule of GST-SUMO-1 (
45 kDa) and confirms results obtained in vivo. The slowly migrating bands observed in GST-ER1 assay and marked with a solid circle are nonspecific cross-reacting signals because they are present also in the controls without ATP and SUMO-1. Then we constructed two new GST-tagged mutants encompassing the C region (aa 176251) and the hinge region (aa 251305) (see Fig. 2A
). As shown in Fig. 2D
, only the ER
hinge region was modified by SUMO-1 in this in vitro assay, indicating that the ER
domain from residues 251305 was sufficient to function as a substrate for sumoylation, at least in vitro.
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hinge region contains seven lysine residues (see Fig. 3A
vector, several ER
mutants (illustrated in Fig. 3A
sumoylation in vivo by transfection in COS-7 cells. Transfected cells were lysed in the presence of NEM and ER
sumoylation evaluated by Western immunoblotting using equal amounts of total cellular proteins. Results are shown in Fig. 3B
, whereas Del2 appeared to be a stronger substrate for SUMO-1. One possible interpretation of this intriguing result could be that this deletion altering ER
conformation generates more efficient SUMO acceptor sites. However, double mutant K266R/K268R and triple mutant 3K/R exhibited a significant lower level of sumoylation compared with the wild type, indicating that ER
was mainly sumoylated at these two sites. The result obtained with the mutant 3K/R was unexpected because these lysines are included in the both the VP16- and GST-ER3, which were not sumoylated either in vivo or in vitro (see Fig. 2
constructions used in these experiences. In the experiences illustrated in Fig. 2
regions, in which the lysines 299, 302, and 303 are in the boundary to VP16 or GST proteins. Our interpretation is that these fusion configurations alter the conformation of these potential SUMO acceptor sites. Moreover, when the five lysines located in the hinge region were mutated (5K/R), the sumoylation signal drastically diminished, even if a residual band was barely detectable. Thus, we cannot exclude the possibility that residual sumoylation may occur at the lysine residues outside of the hinge region. To begin to address the effects of SUMO-1 modification on ER
function, we examined the impact of SUMO-1 modification on ER
transcription activity. To this aim, we performed transient transfection assays using ERE-Luc as reporter construct. HeLa cells were cotransfected with the reporter plasmid together with wild-type ER
or mutants expressing plasmids in the presence of E2. All hinge region mutants analyzed showed impaired E2-induced transcription, compared with wild-type ER
. Expression levels of wild-type ER
and mutants were normalized based on the results of Western blot analysis (data not shown), and immunofluorescence experiments revealed no significant difference between the subcellular localizations of these mutants and of wild-type ER
transfected in HeLa cells (data not shown). Thus these data indicate that SUMO-1 modification positively regulates the ligand-dependent ER
activity. However, coexpression with SUMO-1 still enhanced the transcriptional activity of hinge region mutants in a dose-dependent manner (see Fig. 6
transcriptional activation cannot be attributed only to the sumoylation of ER
itself. However, we cannot rule out that this effect results from the residual sumoylation present in the mutants.
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transcriptional function, we tested the capacity of each hinge region mutant to bind DNA. An EMSA was performed using nuclear extract prepared from COS-7 cells transfected with wild-type ER
or mutants. The results of this assay show that 3K/R and K266R/K268R mutants exhibited reduced DNA binding intensity compared with wild-type ER
(Fig. 3D
binding specificity was further confirmed by the application of ER
-specific antibody (Fig. 3D
PIAS1 and PIAS3 Act as E3 Ligase for ER
Sumoylation
Recently, a family of PIAS (protein inhibitor of activated signal transducer and activator of transcription) proteins was described as SUMO-E3 ligases for critical target proteins such as p53, c-jun, LEF1 (32, 33, 34, 35), and certain steroid receptors (36, 37, 38). Therefore, we investigated whether PIAS1 and PIAS3 proteins, which can directly interact with ER
in vitro (data not shown), were capable of enhancing SUMO-1 attachment to ER
in intact cells. COS-7 cells were cotransfected with ER
, His6-SUMO-1, and PIAS1- or PIAS3-expressing vectors (see Fig. 4A
). The coexpression of PIAS1 or PIAS3 with ER
and SUMO-1 strongly enhanced the intensity of the slower-migrating forms of ER
corresponding to SUMO-1-conjugate receptor (Fig. 4A
, lanes 4 and 6), indicating that both PIAS1 and PIAS3 act as SUMO-1 E3 ligases for ER
sumoylation. Notably, PIAS1 expression induced additional bands of ER
that had shifted to a higher molecular weight than the two bands detected in the presence of SUMO alone. This result suggests that PIAS1 expression may induce sumoylation of other sites or can form polysumoylation chains.
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310407) abolished the ability of PIAS1 to enhance ER
sumoylation (Fig. 4B
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Ligand-Mediated Sumoylation of ER
The binding of ligands to ER
, in addition to altering the conformation and activity of the receptor, influences its stability. For instance, estradiol binding accelerates receptor degradation, and tamoxifen treatment has been shown to stabilize ER
(39). We next addressed the issue whether ER
ligands 17ß-estradiol (E2) and 4-OH-tamoxifen could affect the sumoylation of ER
. COS-7 cells were cultured under sterol-depleted conditions for 48 h, and then transfected with ER
and His6-SUMO-1-expressing plasmids, and treated with E2, tamoxifen, or ethanol vehicle. The His-tagged proteins were purified by chromatography on nickel-charged agarose beads 18 hr after hormone treatment and analyzed by Western blotting using an anti-ER
monoclonal antibody. As seen in Fig. 5A
, no ER
slower-migrating bands were detected in the presence of SUMO-1 and in the absence of ligands (lanes 4, 7, and 10). However, ER
sumoylation was stimulated in the presence of E2 and, also, to a lesser extent, of 4-OH-tamoxifen (Fig. 5A
, lanes 56). Reflecting our previous results, we found that PIAS1 or PIAS3 enhanced the sumoylation of ER
, but only in the presence of E2 (Fig. 5A
, lanes 8 and 11) and tamoxifen (Fig. 5A
, lanes 9 and 12). These data, obtained in intact cells, clearly indicate that ER
sumoylation is strictly ligand dependent also in the presence of PIAS1 and PIAS3.
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reflects a property of endogenous proteins. Specifically, we attempted to detect sumoylated ER
in ER
-positive MCF-7 breast cancer cells. The His6-SUMO-1-expressing plasmid was transiently expressed in MCF-7 cells cultured under sterol-depleted conditions for 48 h, and then treated with E2 or with the ethanol vehicle. His6-SUMO-1 and its conjugates were then purified by nickel chromatography, and ER
was detected by immunoblotting analyses with anti-ER
antibodies. Slower-migrating bands corresponding to sumoylated ER
were clearly detected when His6-SUMO-1 was expressed in MCF-7 cells treated with E2 (Fig. 5B
is not merely a result of the overexpression of the protein. Analogous experiments carried out in the presence of PIAS1 and PIAS3 proteins showed an enhanced ER
sumoylation (Fig. 5B
occurs naturally in the cells in the absence of ectopically expressed SUMO-1 and SUMO-E3 ligases. To determine the sumoylation of endogenous proteins, ER
was immunoprecipitated from extracts of MCF7 cells treated with E2 for 18 h with anti-ER
antibody and analyzed by Western immunoblotting with anti-SUMO1 and anti-ER
antibodies. As shown in Fig. 5C
antibody detected a major band of approximately 66 kDa (marked with an arrowhead) corresponding to ER
and one slow-migrating form (marked with a star) that comigrated with the major band recognized by anti-SUMO-1 in the right panel (marked with a star). Taken together, these results strongly indicate that the in vivo sumoylation of endogenous, as well as exogenously expressed, ER
is hormone dependent and that members of the PIAS family, PIAS1 and PIAS3, function as E3 ligases for this nuclear receptor.
Regulation of ER
-Dependent Transactivation by SUMO-1 Modification Machinery
We then investigated whether important components of the sumoylation pathway, PIAS proteins, Ubc9 and SUMO-1 itself, affected the transcriptional activity of ER
. We performed transient transfection assay in HeLa cells using ERE-Luc as reporter construct. As shown in Fig. 6
, AC the coexpression of ER
with SUMO-1 increased the E2-dependent transcriptional activity of the reporter promoter in a dose-dependent manner. The expression of PIAS-3 with ER
strongly activated the E2-dependent transcription (Fig. 6A
). Surprisingly, PIAS1, which has been shown to enhance ligand-dependent ER
transactivation (40), inhibited ER
function (Fig. 6B
). However, we did not use the same ER
-sensitive reporter gene, and several studies indicate that PIAS proteins may play a role of activators or repressors depending on the cell and promoter contexts (41). In addition, we demonstrate that PIAS1 modulated ER
-dependent transcription independently from its SUMO-1 conjugation activity, because the PIAS1
310407 mutant, which lacks its E3 ligase activity, inhibited ER
function as well as the wild type (Fig. 6B
). Using the same reporter gene assay, we tested the effect of Ubc9 on ER
-dependent transactivation. As shown in Fig. 6C
, the expression of SUMO-1 and Ubc9 enhanced the transcriptional activity of ER
in a dose-dependent manner, pointing out Ubc9 as a new regulator of ER
. However, this behavior was not altered when the catalytically inactive form of Ubc9, Ubc9/C93S, was used. These experiments are consistent with the observations that Ubc9 or Ubc9/C93S still enhanced the transcriptional activity of sumoylation-deficient ER
mutants (see Fig. 6
, DF).
Taken together, these results indicate that, although Ubc9, PIAS1, and PIAS3 are members of the sumoylation machinery, they regulate ER
transcription via a sumoylation-independent mechanism.
SUMO Conjugation Regulates ER
-Mediated Transcription
To further examine the role of sumoylation on ER
transcription regulation, we used two different approaches. First, we analyzed the influence of SUMO-1 on ER
transcription mediated by PIAS proteins and Ubc9. When SUMO-1 was coexpressed with PIAS1, PIAS3, or Ubc9, the SUMO-1-mediated activation of ER
was strongly repressed (see Fig. 6
, AC). This repression was dose dependent, and was not due to a decrease of ER
expression (data not shown). One interpretation of these data might be that simultaneous expression of SUMO-1 and sumoylation enzymes resulted in an extensive sumoylation of ER
and/or its cofactors, which was responsible for the repression of reporter activity. To support this point, we used the catalytically inactive form of Ubc9, Ubc9/C93S, which acts as dominant-negative mutant. As shown in Fig. 6
C, coexpression of Ubc9/C93S and SUMO-1, instead of repressing the SUMO-1-mediated activation of ER
, enhanced the reporter activity.
Next we used a Gal4-ER3 fusion protein containing the ER
ligand-binding domain and the AF2 region (aa 297595) and lacking the hinge region. This chimeric protein has full transactivation potential, compared with its wild-type counterpart, in the context of a reporter plasmid containing a Gal4-driven promoter. First, we tested the effect of PIAS3 and SUMO-1, alone or in combination, on the activity of GAL4-ER3 in the presence of E2 in HeLa cells. As shown in Fig. 7
, the addition of E2 activated Gal4-ER3 transcription, and this activity was strongly enhanced by PIAS3, similarly to wild-type ER
when targeted to its own DBD (see Fig. 6A
). In contrast, increased amounts of SUMO-1 barely affected the activity of Gal4-ER3, on which it had, rather, an inhibitory effect. Thus, in the absence of the hinge region, ER
is not responsive to SUMO-1 activation. The coexpression of increased amounts of SUMO-1 with PIAS3 resulted in an almost complete inhibition of Gal4-ER3 transactivation. Because we demonstrated that ER3 region was not sumoylated either in vivo or in vitro (see Fig. 2
), the inhibitory effect of SUMO-1 on PIAS3-induced Gal4-ER3 activity could be a consequence of an increased SUMO modification of ER
coregulators. Collectively, these data indicate that SUMO-1 regulates the transcriptional activity of ER
directly through ER
modification and indirectly by affecting the activity of coregulators. Moreover, the coexpression of PIAS or Ubc9 proteins with SUMO-1 could lead to the formation of repressor complexe(s) or titrate away a coactivator.
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| DISCUSSION |
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is a direct substrate of SUMO-1 posttranslational modification in intact cells and under cell-free conditions, even if ER
sequence lacks consensus SUMO-1 attachment motifs. Importantly, we show that sumoylated forms of endogenous receptor are present in the ER
-positive cell line, MCF-7 (Fig. 5C
. Mutations inhibiting SUMO modification reduced the transcriptional activity of ER
, indicating that the sumoylation of this receptor may have a positive effect on ER
transcriptional activity. Previous studies have shown that different nuclear receptors, namely androgen receptor (AR), glucocorticoid receptor (GR), and progesterone receptor, undergo sumoylation within a region that functions as a transcriptional inhibitory domain (38, 42, 43). In particular, progesterone receptor sumoylation regulates its autoinhibition and transrepression activities (43). Substituting the SUMO-attachment lysines to arginines in this domain enhances the transactivation potential of the receptor, indicating an inhibitory role of SUMO in signaling of this nuclear receptor (28). The major sites of SUMO modification in the GR and AR map to the previously defined synergy control motif, suggesting SUMO-1 may regulate synergistic activation for these factors. According to this idea, suppression of SUMO acceptor lysines or overexpression of SUMO-1 was found to increase the activity of GR (42, 44) and AR (38, 45) on promoters containing multiple, but not single, binding sites. The picture emerging from different reports suggests that the effects of SUMO posttranslational modification on nuclear receptor activity are promoter specific, might depend on the cellular context, and reflect combinatorial effects of receptors and coactivators. These findings may explain some discrepancies concerning the effects of SUMO modification on specific transcription factors.
The mechanisms governing SUMO substrate specificity and the recognition of nonconsensus sites are not well understood at this time. Additional parameters should help determine SUMO target sites. In fact, in several verified SUMO-1 targets, modified lysines are not always present within the postulated consensus motif (K65 of PML, K1182 of HIPK2, K446 of Mdm2, K164 of PCNA... ), and others are still sumoylated when all consensus sites are mutated (reviewed in Ref.46). In addition, tandem mass spectrometry (MS)-based strategies recently permitted the identification, within CENP-C, SUMO-2, and Ubc9 proteins, of several sumoylated lysine residues that were not in the consensus sumoylation motif (47). It seems that even in the absence of a targeting motif, SUMO-E3 ligase can determine substrate specificity for in vivo sumoylation. Recently, several SUMO-E3 ligases that may promote the selection of target proteins have been identified (19, 32, 34, 41, 46). Our results show that both PIAS1 and PIAS3 strongly stimulate the sumoylation of ER
in the presence of ligands, E2 and tamoxifen (Figs. 4A
and 5A
); thus both proteins act as E3-SUMO ligases for ER
sumoylation. We have also shown that ER
sumoylation is strictly ligand dependent in living cells, suggesting that hormone binding, and perhaps the subsequent altering of receptor conformation, is essential for its interaction with components of the SUMO modification machinery. However, when diverse regions of ER
were conjugated to the transactivation region of VP16 or to GST, the sumoylation of fusion proteins was independent of the presence of ligand, both in vivo and in vitro. In our experiments, we observed another major difference between ER
and truncated fusion proteins. As Fig. 3B
illustrates, lysines 299, 302, and 303 seem to be important SUMO-1 acceptors, because their mutation to arginines clearly reduces sumoylation. However, these lysines are included in both VP16- and GST-ER3, which were not sumoylated either in vivo or in vitro (see Fig. 2
). One possibility might thus be that in the truncated fusion proteins, in which lysines 299, 302, and 303 are located in the boundary to VP16 and GST fragments (see Fig. 2A
), these sumoylation sites are not accessible to the posttranslational modification machinery.
The ability of ligands to regulate ER
sumoylation in vivo may also be explained, at least in part, by receptor compartmentalization. The unliganded form of ER
is diffusely distributed throughout the nucleoplasm, and addition of estrogen or tamoxifen results in a redistribution of ER
in discrete punctuate structures, which can regulate or facilitate the interaction of ER
with the sumoylation machinery.
In our effort to understand the functional significance of ER
sumoylation, we tested whether key molecules of the SUMO-1 conjugation system, including SUMO-1, Ubc9, and PIAS, affected the transcriptional activity of ER
. As expected, the E2-dependent transcription of ER
was enhanced by SUMO-1 overexpression (Fig. 6
, AC). As shown in Fig. 6
, A and B, whereas PIAS3 strongly increased the transcriptional activity of ER
, PIAS1 acted as an inhibitor. Mammalian PIAS proteins, originally described as specific inhibitors of signal transducer and activator of transcription signaling (48), can interact directly with several transcription factors, including various nuclear receptors, and regulate their transcriptional activity (40, 49, 50, 51). Several studies indicate that PIAS proteins have various activities, either dependent or independent from their E3 ligase function (36, 41). Our results show that the E3 ligase activity of PIAS1 is not required for ER
regulation; in fact, a PIAS1 mutant lacking the ring finger-like domain, essential for ER
sumoylation (see Fig. 4B
), could still modulate ER
transcription (Fig. 6B
). This was also the case for Ubc9, which activated ER
transcriptional activity independently from its sumoylation activity (Fig. 6C
). In the same reporter assay, PIAS1, PIAS3, and Ubc9 almost completely repressed ER
-mediated transactivation when coexpressed with SUMO-1. One attractive possibility is that this repression could be a consequence of increased SUMO modification of ER
and its regulators. In fact, when ER
was modified to a low extent by SUMO-1 alone (Fig. 4A
, lane 2), ER
-mediated transcription increased (Fig. 6
, AC). The addition of PIAS or Ubc9 proteins, which strongly increases sumoylation of ER
(see Fig. 4A
; compare lane 2 with lanes 4 and 6 and Fig. 4B
) as well as of ER
coactivators, drastically repressed SUMO-1-dependent ER
transactivation (Fig. 6
, AC). This is consistent with the observation that the coexpression of SUMO-1 with Ubc9/C93S, the expression of which resulted in a significant reduction of the SUMO-modified ER
(Fig. 1D
), did not inhibit the SUMO-1-dependent ER
activation (Fig. 6C
). This raises the possibility that sumoylation of ER
and coregulators occurs sequentially at different stages of the ER
transcription complex formation. Initially, sumoylation has a direct effect on ER
itself (modifying dimerization, interactions with coregulators, binding to estradiol or to DNA responsive elements... ) and may promote its recruitment to the promoter to activate transcription. Subsequent modifications of the receptor and/or coregulators may later disassemble transcriptional complexes and turn down transcription. It is important to note that the function of ER
as a transcriptional regulator can be modulated through associations with a number of cofactors that are also sumoylated, i.e. GR-interacting protein 1, steroid receptor coactivator 1, histone deacetylase 1, histone deacetylase 4, p300, and PIAS proteins themselves (24, 25, 26, 27), which further complicates the analysis of SUMO effects on ER
transcriptional activity. Several results in the present study supported the conclusion that SUMO-1 pathway regulates ER
-dependent transcription through the sumoylation of ER
itself and its coregulators. As shown in Fig. 7
, no SUMO-1-mediated enhancement of reporter activity was observed when we used Gal4-ER3, which lacks the hinge region containing the SUMO sites. Coexpression of SUMO-1 with PIAS3 resulted in an almost complete inhibition of PIA3-mediated Gal4-ER3 transactivation. Thus the synergic effect of PIAS3 and SUMO-1 to repress Gal4-ER3 activation did not result from an increased sumoylation of ER3 region, which was neither sumoylated in vivo or in vitro (see Fig. 2
). Finally, mutations that prevented SUMO modification significantly impaired E2-induced transcription (Fig. 3C
).
Because lysine serves as the attachment site for several modifications, including ubiquitination, acetylation, and methylation, it is also reasonable to speculate that ER
sumoylation plays a role by antagonizing other posttranslational modifications. Importantly, ER
can be acetylated in vitro and in vivo by p300 at the same lysines as those required for SUMO modification (lysines 299, 302, and 303 within the hinge region) (52). Compared with wild-type ER
, arginine substitution at the ER
acetylation site enhanced the E2-dependent activity of ER
, suggesting that direct ER
acetylation normally suppresses ligand sensitivity (52). Of particular interest is the observation that a somatic mutation (K303R) within the ER
hinge region has been correlated to breast cancer development. This mutation is present in 34% of analyzed patients with atypical breast hyperplasia (53). These experiences indicate that the acetylation of ER
regulates the ligand sensitivity; hence, this mutation can be involved in early stages of breast cancer development. The findings that ER
can be efficiently acetylated in vitro by p300, and that acetylated ER
is present in MCF-7 cells (52), point out the intriguing possibility that the transcriptional activity of ER
could be dynamically regulated by competition between SUMO and other modifiers for common lysine(s).
Although the molecular mechanism underlying ER
sumoylation and its regulation remains unknown, our study has demonstrated the importance of SUMO modifications as a novel posttranslational step for the regulation of ER
function. Chromatin immunoprecipitation studies have shown that ER
and coactivators assemble on target promoters in a sequential and rapidly cycling manner. Because SUMO-1 modification is a specific, reversible, and highly dynamic process, it may provide an important means to regulate the assembly and disassembly of transcriptional complexes. Further studies are essential to better elucidate the complexity of the molecular mechanism involved in ER
-mediated gene activation. In particular, it will be important to determine exactly when and where ER
sumoylation occurs, how it is regulated, and how it contributes to the physiological estrogen response. The functional analysis of lysines identified as targets for ER
sumoylation will help determine whether they play a role in the normal development of the mammary gland and whether they may be involved in breast cancer progression.
| MATERIALS AND METHODS |
|---|
|
|
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expression vector, which encodes the full-length human ER
, and the pERE-Luc reporter plasmid, which contains three copies of ER
consensus elements (ERE) upstream from the TATA box fused to the luciferase gene, have been described previously (29). The pGal4-Luc reporter plasmid contains six Gal4 consensus elements upstream from the thymidine kinase promoter region fused to the luciferase gene (30). ER
deletion mutants were constructed by PCR. Fragments encoding amino aa 1180, 176302, 297595, 176251, and 251305 to create, respectively, ER1, ER2, ER3, DBD, and hinge domain were generated by amplification of ER
cDNA. The PCR products were cloned into the pSG-FNV vector downstream and in frame with the sequence coding for the VP16 activation domain to create VP16-ER1, VP16-ER2, and VP16-ER3, and into the pGEX-4T2 vector (Amersham Pharmacia Biotech) downstream and in frame with the GST tag to create GST-ER1, GST-ER2, GST-ER3, and GST-Hinge. To generate the GST-Flag-DBD vector, the DBD amplification product was first cloned into a pSG5-Flag vector (31) downstream and in frame with the Flag epitope. The Flag-DBD insert was then subcloned into the pGEX-4T2 vector downstream and in frame with the GST. Gal4-ER3 mammalian expression vector was obtained by subcloning the ER3 amplification products into the Gal4-poly II plasmids described previously (31). The His6-tagged SUMO-1 (pSG5-His6-SUMO-1) expression vector and the GST-tagged SUMO-1 (GST-SUMO-1) expression vector were kind gifts from Anne Dejean (Institut Pasteur, Paris, France) and David Wotton (University of Virginia, Charlottesville, VA), respectively. pSG5-Flag-PIAS3 and pSG5-Flag-PIAS1 were obtained by cloning the full-length cDNAs of PIAS3 and PIAS1 from pCMV-Flag-PIAS3 and pCMV-Flag PIAS1 [kindly provided by Tarik Möröy (Institut für Zellbiologie, Essen, Germany) and Ke Shuai (University of California, Los Angeles, CA)] in frame with the Flag epitope in pSG5-Flag. GST-tagged UBC9 and the pFLAG-PIAS1
310407 expression vectors were gifts from Nadine Varinn-Blank (Institut Cochin, Paris, France) and Jorma J. Palvimo (Biomedicum Helsinki, Institute of Biomedicine, Helsinki, Finland), respectively. pDuet-Aos1/Uba2, a bacterial expression plasmid encoding both subunits of SUMO-E1, was a gift from Christopher D. Lima (Sloan Kettering Institute, New York, NY). pSG5-Ubc9 and pSG5-Ubc9/C93S were gifts from Helen Hurst (Cancer Research, Molecular Oncology Unit, Hammersmith Hospital, London, UK) and Ron Hay (Center for Biomolecular Sciences, University of St. Andrews, St. Andrews, Scotland, UK). The cloned products were verified by DNA sequencing, and protein expression was checked.
Site-Directed Mutagenesis
The plasmid used for expression and mutagenesis was pSG5-ER
. ER
del1 (deletion aa 234253), ER
del2 (deletion aa 254269) and all ER
K/R mutants (K266R/K268R in which Lys 266 and Lys 268 codons were mutated to an Arg codon, 3K/R in which Lys 299, Lys 302 and Lys 303 were mutated to an Arg codon and 5K/R in which Lys 266, Lys 268, Lys 299, Lys 302 and Lys 303 were mutated to an Arg codon) were obtained by using the QuikChange XL Site-Directed Mutagenesis kit (Stratagene, La Jolla, CA) according to the manufacturers instructions. All constructs were confirmed by DNA sequencing.
Cell Culture and Transient Transfection
HeLa, MCF-7, and COS-7 cells were maintained at 37 C in DMEM supplemented with 2 mM L-glutamine, 100 U/ml penicillin, 100 µg/ml streptomycin (Life Technologies, Gaithersburg, MD) and 10% fetal calf serum (BioWhittaker, Inc., Walkersville, MD). For MCF-7 cells, the medium was further supplemented with 1 mM sodium pyruvate, nonessential aa, and glutamine. HeLa and MCF-7 cells were transfected using ExGen 500 (Euromedex, Mundolsheim, France). COS-7 cells were transfected using Fugene 6 (Roche Molecular Biochemicals, Indianapolis, IN) according to the manufacturers protocol. Briefly, for in vivo sumoylation, COS-7 and MCF-7 cells were plated, respectively, at a density of 1.5 x 106 cells and 3 x 106 cells per 100-mm tissue culture dishes, 24 h before transfection. Six hours after transfection, the cells were treated with 100 nM E2 (Sigma Chemical Co., St. Louis, MO), and then harvested 18 h later. To study the effect of hormones on ER
sumoylation, COS-7 and MCF7 cells were cultured under sterol-depleted conditions in fresh phenol red-free medium (Life Technologies) containing 10% charcoal-stripped fetal bovine serum (Life Technologies) for 48 h before transfection. Eight hours after transfection, the cells were supplied with 100 nM E2, 5 µM 4-OH-tamoxifen (Sigma), or ethanol vehicle as indicated, and then harvested 18 h later. Protein expression was analyzed by Western blotting.
Immunoblotting and Immunoprecipitation
For the preparation of whole cell extracts, transfected cells were washed with ice-cold PBS and harvested in modified RIPA buffer (50 mM Tris-HCl, pH 7.8; 150 mM NaCl; 5 mM EDTA; 0.5% Triton X-100; 0.5% Nonidet P-40; 0.1% sodium deoxycholate) and a cocktail of protease inhibitors in the presence, when indicated, of 20 mM NEM. Lysates were centrifuged to separate insoluble proteins. Concentrated (2x) sodium dodecyl sulfate (SDS) sample buffer was added to lysate samples; after 5 min heating at 95 C, proteins were resolved on SDS-PAGE, transferred onto a polyvinylidene difluoride membrane, and then blocked by incubation at room temperature for 1 h in PBS containing 5% nonfat dry milk. ER
was detected with mouse monoclonal anti-ER
Ab15 antibody (NeoMarkers) and horseradish peroxidase-conjugated rabbit antimouse Igs (DAKO Corp., Carpinteria, CA). For ER
immunoprecipitation, Cos-7 cell extracts were precleared with protein G-agarose and incubated with the anti-ER
mouse monoclonal antibody Ab10 (NeoMarkers, Labvision Corp., Fremont, CA), after which immune complexes were collected with protein G-agarose. After washing, bound proteins were released in 2x SDS sample buffer and resolved on 8% SDS-PAGE gel, electroblotted onto a polyvinylidene difluoride membrane, and immunoblotted with rabbit polyclonal antibody against SUMO-1 (Santa Cruz Biotechnology, Inc., Santa Cruz, CA) and horseradish peroxidase-conjugated goat antirabbit Igs (DAKO Corp.). To analyze the sumoylation of endogenous ER
, extracts from MCF7 cells, treated for 18 h with 100 nM E2, were immunoprecipitated with anti-ER
D12 antibody (Santa Cruz Biotechnology) and analyzed by Western immunoblotting with mouse monoclonal anti-SUMO1 (Zymed Laboratories, Inc., South San Francisco, CA) and anti-ER
antibody G20 (Santa Cruz Biotechnology).
The proteins were visualized by chemiluminescence (Roche Molecular Biochemicals) following the manufacturers instructions.
Nickel Affinity Pull-Down Assay
COS-7 cells (70% confluent in 10-cm diameter Petri dishes) transfected as described above were washed in ice-cold PBS and harvested in 1ml of buffer A (6 M guanidinium-HCl; 10 mM Tris-HCl, pH 8; 100 mM NaH2PO4), briefly sonicated to reduce viscosity, and then centrifuged. The protein concentration of the supernatants was measured by Bio-Rad protein assay (Bio-Rad Laboratories, Hercules, CA) and equal protein amounts were mixed with 40 µl of Ni-NTA-magnetic agarose beads (QIAGEN, Chatsworth, CA), prewashed with lysis buffer A, and then incubated overnight at 4 C. The beads were successively washed three times with 1 ml of buffer A plus 10 mM imidazole, and then twice with 1 ml of buffer B (8 M urea; 100 mM NaH2PO4; 10 mM Tris-HCl, pH 6.3), and once in cold PBS. After the last wash, the beads, eluted by boiling in the SDS-sample buffer, were subjected to SDS-PAGE, and the proteins were transferred to a PVDF membrane (Millipore Corp, Milford, MA). Western blotting was performed using the mouse monoclonal antibody Ab15 (NeoMarkers) to detect full-length ER
and ER1 (aa 1180), the rabbit polyclonal antibody G-20 (Santa Cruz) was used to detect ER2 (aa 176302), and the rabbit polyclonal antibody HC-20 (Santa Cruz) was used to detect ER3 (aa 297595).
In Vitro SUMO-1 Conjugation Assay
GST-tagged Ubc9, -SUMO-1(GG), -ER1, -ER2, -ER3, Flag-DBD and -Hinge were isopropyl-ß-D-thiogalactopyranoside induced, expressed in Escherichia coli BL21 (Invitrogen), and purified by affinity chromatography using glutathione-sepharose 4B (Amersham Pharmacia Biotech, Uppsala, Sweden) as recommended by the manufacturer. Bound proteins were eluted using 20 mM glutathione. The SUMO E1 (Aos1/Uba2 dimer) was expressed in Rosetta (Novagen, EMD Biosciences, Darmstadt, Germany) and purified via a His tag on Uba2 with a nickel chelation affinity column using NI-NTA agarose (QIAGEN) according to the manufacturers recommended protocol. One microgram of purified GST-tagged ER
mutants was mixed with 250 ng Ubc9, 125 ng Aos1/Uba2 with or without 2 µg SUMO-1, and then incubated for 2 h at 30 C in the presence of 50 mM Tris (pH 7.5), 5 mM MgCl2, with or without 2 mM ATP in a 20 µl volume. Reactions were stopped with SDS-PAGE sample buffer, and SUMO conjugates were separated on SDS-PAGE and analyzed by Western blotting using the mouse monoclonal antibody Ab15 (NeoMarkers) to detect ER1 (aa 1180), the rabbit polyclonal antibody G-20 (Santa Cruz Biotechnology) to detect ER2 (aa 176302) and hinge domain (aa 251305), and the rabbit polyclonal antibody HC-20 (Santa Cruz Biotechnology) to detect ER3 (aa 297595). M2 monoclonal antibody (Sigma) was used to detect the Flag-DBD domain (aa 176251).
Luciferase Reporter Assay
HeLa cells (7.5 x 104) were plated in 24-well plates 24 h before transfection. Transfections were performed using ExGen 500 (Euromedex). The transfected DNA included 50 ng of reporter plasmid and 25 ng of pRL-TK Renilla luciferase vector (Promega) used as internal control, together with various amounts of expression vectors, as indicated. Total transfected DNA was kept constant by adding empty pSG5-Flag vectors. The cells were induced with 10 nM E2 24 h after transfection and then harvested after an additional 24 h and assayed for luciferase activity following the manufacturers instructions. Luciferase activities were normalized to the activity of the internal control Renilla luciferase. Each set of experiments was performed in triplicate and repeated at least three times.
EMSA
EMSAs were carried out using the Gelshift ER Kit (Active Motif Europe, Rixensart, Belgium) according to the manufacturers instructions. Briefly, 7.5 µg nuclear extracts, purified from COS-7 cells (using nuclear extract kit, active motif) transfected with vectors expressing wild-type or mutant ER
, were incubated for 20 min at 4 C in binding buffer B. In supershift assays, nuclear extracts were incubated for 20 min in the presence of specific ER
antibody. We then added 14,000 cpm of 32P-labeled double-stranded templates containing the consensus binding site for ER
in buffer C and left the mixture at 4 C for 20 min. After incubation, the mixture was loaded onto a 5% (wt/vol) polyacrylamide gel (29:1 acrylamide to bisacrylamide ratio) in 0.5x TBE, and run at room temperature at 12.5 V/cm for 2 h. The gels were dried and the protein-DNA complexes were visualized by autoradiography. The probes were end-labeled using [
-32P]ATP (Amersham Pharmacia Biotech) and T4 polynucleotide kinase (Roche), and purified through MicroSpin TMG-25 columns (Amersham Biosciences, Piscataway, NJ).
| ACKNOWLEDGMENTS |
|---|
| FOOTNOTES |
|---|
First Published Online June 16, 2005
Abbreviations: aa, Amino acids; AF, activation function; AR, androgen receptor; DBD, DNA-binding domain; E2, 17ß-estradiol; ER, estrogen receptor; ERE, estrogen response element; GR, glucocorticoid receptor; GST, glutathione-S-transferase; NEM, N-ethylmaleimide; Ni-NTA, nickel-nitrilotriacetic acid; PIAS, protein inhibitor of activated signal transducer and activator of transcription; SUMO, small ubiquitin-like modifier.
Received for publication January 17, 2005. Accepted for publication June 10, 2005.
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