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Protein Level and Survival Function by DBC-1Department of Molecular Medicine and Institute of Biotechnology, University of Texas Health Science Center at San Antonio, San Antonio, Texas 78245
Address all correspondence and requests for reprints to: Thomas G. Boyer, Department of Molecular Medicine and Institute of Biotechnology, University of Texas Health Science Center at San Antonio, 15355 Lambda Drive, San Antonio, Texas 78245-3207. E-mail: boyer{at}uthscsa.edu.
| ABSTRACT |
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(ER
). Because a switch from ligand-dependent to ligand-independent activation of ER
-regulated breast cancer cell growth and survival may define a path to endocrine resistance, enhanced mechanistic insight concerning the ligand-independent fate and function of ER
, including a more complete inventory of its ligand-independent cofactors, could identify novel markers of endocrine resistance and possible targets for therapeutic intervention in breast cancer. Here, we identify the deleted in breast cancer 1 gene product DBC-1 (KIAA1967) to be a principal determinant of unliganded ER
expression and survival function in human breast cancer cells. The DBC-1 amino terminus binds directly to the ER
hormone-binding domain both in vitro and in vivo in a strict ligand-independent manner. Furthermore, like estrogen, the antiestrogens tamoxifen and ICI 182,780 (7
,17ß-[9-[(4,4,5,5,5-pentafluoropentyl)sulfinyl]nonyl]estra-1,3,5(10)-triene-3,17-diol) disrupt the DBC-1/ER
interaction, thus revealing the DBC-1/ER
interface to be a heretofore-unrecognized target of endocrine compounds commonly used in hormonal therapy. Notably, RNA interference-mediated DBC-1 depletion reduces the steady-state level of unliganded but not liganded ER
protein, suggesting that DBC-1 may stabilize unliganded ER
by virtue of their direct association. Finally, DBC-1 depletion promotes hormone-independent apoptosis of ER
-positive, but not ER
-negative, breast cancer cells in a manner reversible by endocrine agents that disrupt the DBC-1/ER
interaction. Collectively, these findings establish a principal biological function for DBC-1 in the modulation of ER
expression and hormone-independent breast cancer cell survival. | INTRODUCTION |
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(ER
) and ß (ERß) (5, 6, 7, 8). ER
is the predominant receptor isoform expressed in breast cancer cells, and approximately 70% of breast cancer patients score positive for ER
at diagnosis (9, 10, 11, 12). ER
is therefore a dominant etiologic and valuable predictive factor with respect to breast cancer development and hormone sensitivity status. Endocrine therapy, which seeks to block ER-mediated mitogenic signaling, has emerged as one of the most important systemic therapies in breast cancer management; however, therapeutic resistance, either inherent (de novo resistance) or acquired during treatment (acquired resistance) remains a significant clinical roadblock to effective disease management (13).
Although de novo resistance to endocrine therapy derives primarily from loss of ER
expression, the biological mechanism underlying acquired endocrine resistance is incompletely understood and almost certainly multifactorial in nature (14, 15). Nonetheless, the emergence of endocrine resistance is often coincident with a shift from ligand-dependent to ligand-independent control of ER
-regulated breast cancer cell growth and survival, possibly reflecting bidirectional molecular crosstalk between ER
and growth factor signaling pathways (14, 16, 17). Because ligand-independent activation of ER
may therefore define a path to endocrine resistance, enhanced mechanistic insight concerning the ligand-independent function and regulation of ER
, including a more complete inventory of its ligand-independent cofactors, could identify novel prognostic markers of endocrine resistance and possible targets for therapeutic intervention in breast cancer. Toward this objective, we have undertaken a proteomics-based approach to isolate ligand-independent ER
protein interaction networks. Herein, we identify the deleted in breast cancer-1 gene product DBC-1 (KIAA1967) to be a direct ligand-independent binding partner of ER
. Functional analyses further reveal DBC-1 to be a principal determinant of unliganded ER
protein levels and survival activity in human breast cancer cells.
The gene encoding DBC-1 was originally identified during a genetic search for candidate breast tumor suppressor genes on a human chromosome 8p21 region frequently deleted in breast cancers. However, refined deletion analysis within this region revealed a second gene, deleted in breast cancer 2 (DBC-2), to encode a likely breast tumor suppressor, and further confirmed that DBC-1 expression is not substantially extinguished in cancers from any source (18). In fact, a search of the Oncomine database of published cancer microarray data (www.oncomine.org), which currently permits analysis of gene expression data derived from 132 DNA microarray datasets among 24 different cancer types, reveals DBC-1 to be statistically significantly upregulated in breast carcinoma vs. normal breast tissue as well as breast ductal carcinoma vs. other cancers (19, 20). Furthermore, DBC-1 was found in three independent studies totaling 369 breast tumor samples to be statistically significantly overexpressed in ER-positive vs. ER-negative breast tumors (21, 22, 23).
Little is currently known regarding the molecular and cellular function of DBC-1 in breast or other tissues. Recently, DBC-1 was linked physically to the TNF-
/nuclear factor
B (NF-
B) pathway by proteomic analysis (24), whereas caspase-dependent processing of DBC-1 early in apoptosis induced by diverse stimuli, including TNF-
, was shown to unmask a proapoptotic function for the DBC-1 carboxyl terminus in the cytosol of moribund cells (25). However, full-length DBC-1 is predominantly localized to the nucleus of healthy cells (25), and its normal biological function therein has heretofore remained unknown. Based on our identification of DBC-1 as a ligand-independent ER
-interacting protein as well as its provocative expression profile in breast cancers, we therefore undertook to explore the physical basis, biological regulation, and functional consequence of the interaction between DBC-1 and ER
in human breast cancer cells. Our findings reveal that the DBC-1 amino terminus binds directly to the ER
hormone-binding domain both in vitro and in vivo in a strict E2-independent manner. Furthermore, like E2, the antiestrogens tamoxifen and ICI 182,780 (7
,17ß-[9-[(4,4,5,5,5-pentafluoropentyl)sulfinyl]nonyl]estra-1,3,5(10)-triene-3,17-diol) disrupt the DBC-1/ER
interaction, thus revealing the DBC-1/ER
interface to be an unanticipated target of these endocrine compounds. Finally, DBC-1, in a manner dependent on direct interaction with ER
, suppresses breast cancer cell apoptosis in the absence of hormone. These findings thus establish a principal biological function for DBC-1 in the modulation of ER
expression and survival activity and further identify DBC-1 as a possible endocrine response determinant and potential therapeutic target in breast cancer.
| RESULTS |
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in Vivo in a Ligand-Independent Manner
interaction partners, we identified DBC-1 by mass spectrometric-based peptide sequence analysis of proteins coimmunoprecipitated specifically with unliganded, but not liganded, ER
(supplemental Fig. 1, which is published as supplemental data on The Endocrine Societys Journals Online web site at http://mend.endojournals.org). To validate the ligand-independent interaction between DBC-1 and ER
in vivo, we used a mammalian two-hybrid interaction analysis. Chimeric proteins consisting of DBC-1 fused to the GAL4 DNA-binding domain and ER
fused to the VP16 activation domain were expressed with or without one another in HeLa cells and examined for their respective abilities to activate transcription from a reporter template controlled by GAL4 DNA-binding sites in both the absence and presence of E2. In the absence of E2, DBC-1 and ER
exhibited a robust interaction that was disrupted by addition of E2 to the cell culture medium (Fig. 1A
is mediated entirely by the amino-terminal half of DBC-1 (Fig. 1B
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using a more biologically relevant approach, we examined the ability of antibodies specific for ER
or DBC-1 to coprecipitate one another in MCF-7 human breast cancer cells, which express both ER
and DBC-1. This analysis revealed that DBC-1 was specifically and reciprocally coimmunoprecipitated along with unliganded, but not liganded, ER
, demonstrating that the two endogenous proteins interact in a strict ligand-independent manner in human breast cancer cells (Fig. 1C
in both T-47D human breast and BG-1 human ovarian cancer cell lines, thus revealing the DBC-1/ER
interaction to be conserved in a variety of ER
-expressing cell lines (Fig. 1D
Heat shock protein 90 (HSP90) together with additional heat shock family members and immunophilins are known to form a heteromeric chaperone complex that sequesters neosynthesized and unliganded ER
in an inactive state, primes it for ligand binding, and protects it from proteolytic degradation (26, 27, 28). We initially examined the physical relationship between unliganded ER
in complex with HSP90-based chaperones and DBC-1 by coimmunoprecipitation analysis using MCF-7 whole-cell lysates. Whereas unliganded ER
immunoprecipitates included not only DBC-1 but also HSP90 (data not shown), DBC-1 immunoprecipitates included unliganded ER
but neither HSP90 nor the immunophilin cyclophilin 40 (CYP40) (Fig. 2A
). Thus, DBC-1 is not a component of the classical HSP90-based molecular chaperone complex. Subsequently, we sought to identify the subcellular pool of unliganded ER
in specific association with DBC-1 by coimmunoprecipitation analysis using fractionated MCF-7 cell lysates. ER
/DBC-1 complexes were found exclusively in the nuclear fraction (Fig. 2B
), thus revealing that unliganded ER
is distributed among at least two distinct protein complexes in human breast cancer cells: a cytosolic HSP90-based molecular chaperone complex and a nuclear DBC-1-containing protein complex.
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Hormone-Binding Domain In Vitro
and to map the reciprocal binding domains on each protein, we tested the ability of glutathione S-transferase (GST)-ER
derivatives to bind to full-length DBC-1 or DBC-1 truncation fragments produced by in vitro translation. DBC-1 bound most efficiently to GST-ER
derivatives 1595 (full-length ER
) and 302595 (ER
hormone-binding domain), although DBC-1 also exhibited weak binding to GST-ER
derivative 251301 (ER
hinge region) (Fig. 3A
1595 (full-length ER
) bound to the extreme amino terminus of DBC-1 (amino acids 1150) (Fig. 3B
hormone-binding domain can accommodate the DBC-1 amino terminus.
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Interface Is a Novel Target of Antiestrogens
-expressing breast cancers (29, 30). Mechanistically, antiestrogens competitively displace E2 from the ER
hormone-binding domain and either block ER
function or induce destabilization and degradation of ER
. Tamoxifen, a prototype of the former class, is a selective ER modulator with antiestrogenic properties in breast and the most widely administered antiestrogen in breast cancer therapy (29, 30). Among the latter class of antiestrogens, ICI 182,780 (Faslodex; fulvestrant) is a selective ER down-regulator and an effective second-line therapeutic agent used to treat breast cancers that have progressed on previous tamoxifen therapy (29, 30, 31). Because these compounds bind directly to the ER
hormone-binding domain, we examined the influence of each agent on the DBC-1/ER
interaction. To this end, we tested the ability of ER
-specific antibodies to coimmunoprecipitate endogenous DBC-1 present in MCF-7 and BG-1 cells cultured in the absence or presence of E2, tamoxifen, or ICI 182,780. Strikingly, we observed that, like E2, both tamoxifen and ICI 182,780 disrupted the DBC-1/ER
interaction, thus revealing the DBC-1/ER
interface to be a heretofore unrecognized target of these endocrine compounds (Fig. 4
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-Dependent Prosurvival Factor in Breast Cancer Cells
interaction in human breast cancer cells, we first established conditions for RNA interference (RNAi)-mediated DBC-1 depletion in MCF-7 cells. Strikingly, we observed that RNAi-mediated DBC-1 knockdown was accompanied by a significant reduction in the steady-state level of ER
protein but not ER
mRNA, suggesting that DBC-1 modulates ER
protein synthesis or stability (Fig. 5
protein, consistent with the possibility that DBC-1 may stabilize unliganded ER
by virtue of their direct physical association (Fig. 5
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protein levels, we examined its role in ER
-dependent breast cancer cell proliferation and survival. RNAi-mediated DBC-1 depletion significantly reduced E2-independent, but not E2-dependent, MCF-7 cell proliferation, an observation concordant with the fact that DBC-1 preferentially binds to and modulates the levels of unliganded ER
(Fig. 6
2-fold) reduction in cell number on d 3 after small interfering RNA (siRNA) delivery followed by growth kinetics similar to control siRNA knockdown cells, we hypothesized that the influence of DBC-1 silencing on ligand-independent cell proliferation may derive, at least in part, from an increase in apoptotic cell death. To address this question, we examined the influence of DBC-1 knockdown on the apoptotic fate of MCF-7 cells cultured in the absence of E2. Under these conditions, DBC-1 depletion increased the percentage of apoptotic cells from 6.2 to 12.8%, thus revealing an antiapoptotic function for DBC-1 in the absence of hormone (Fig. 7A
, we also monitored the influence of DBC-1 knockdown on the apoptotic fate of MCF-7 cells cultured in the presence of E2, which disrupts the DBC-1/ER
interaction, or ICI 182,780, which not only disrupts the DBC-1/ER
interaction but also drastically depletes ER
protein levels. Notably, DBC-1 depletion had no effect on MCF-7 cell apoptosis in the presence of either E2 or ICI 182,780 (Fig. 7A
-negative MDA-MB-231 breast cancer cells cultured in the absence of E2 (Fig. 7B
-dependent manner. We note that we have also attempted to examine the influence of DBC-1 overexpression on breast cancer cell proliferation and survival; however, we have not been able to achieve overexpression of DBC-1 protein in ER
-expressing breast cancer cells, suggesting that DBC-1 expression levels are tightly regulated in this context.
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| DISCUSSION |
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expression and survival activity in human breast cancer cells. Our identification of DBC-1 as a heretofore unrecognized determinant of steady-state ER
protein levels is a novel finding with implications for the regulation and function of ER
in normal and malignant breast epithelial cells. A compelling body of experimental, clinical, and epidemiological evidence suggests that dysregulation of ER
expression is a driving force in the initiation and progression of estrogen-sensitive breast tumors. ER
is the predominant receptor isoform expressed in breast cancer cells, and increased numbers of ER
-expressing cells as well as increased individual cell ER
content can be observed at the earliest stages of breast tumorigenesis (32, 33). It is thus likely that alterations in pathways leading to ER
synthesis and/or degradation underlie the dysregulation of ER
and its consequent manifestations, including enhanced proliferation in breast tumors. Therefore, revelation of the mechanism by which DBC-1 modulates ER
expression should yield important insight concerning the physiological regulation and, possibly, the pathological dysregulation of ER
in normal and malignant breast epithelial cells, respectively.
In this regard, previous work has revealed that unliganded ER
is sequestered by an HSP90-based molecular chaperone complex that protects the neosynthesized receptor from proteolytic degradation and primes it for ligand binding (26, 27, 34, 35). Our observation that HSP90 and CYP40 cannot be coprecipitated along with unliganded ER
by DBC-1-specific antibodies coupled with our finding that DBC-1 and unliganded ER
interact in the nucleus suggests that the cellular reserve of unliganded ER
is partitioned among at least two pools: one comprising cytosolic HSP90-based molecular chaperones and the other nuclear DBC-1. Notably, we observed that DBC-1 depletion preferentially reduced the steady-state level of unliganded ER
protein, suggesting the possibility that unliganded ER
is stabilized by its direct physical association with DBC-1. Thus, DBC-1 could function as a chaperone of ER
in the nucleus in a manner analogous to that of HSP90 toward ER
in the cytosol. Additional studies will be required to elucidate the mechanism by which DBC-1 modulates ER
steady-state protein levels.
Several observations herein suggest a novel antiapoptotic function for the population of unliganded ER
bound by DBC-1. First, apoptosis triggered by DBC-1 depletion in the absence of hormone was not observed in MCF-7 cells codepleted of ER
with ICI 182,780, nor in ER
-negative MDA-MB-231 breast cancer cells. These findings thus reveal an apparent DBC-1-dependent ER
requirement for suppression of apoptosis in the absence of hormone. Second, E2-mediated disruption of the interaction between DBC-1 and unliganded ER
abrogated the increase in MCF-7 cell apoptosis observed to accompany DBC-1 knockdown, suggesting that DBC-1-bound ER
functions to suppress hormone-independent apoptosis. We therefore speculate that a specific pool of unliganded ER
bound by DBC-1 may promote breast cancer cell growth and survival in the absence of hormone.
The underlying mechanism by which DBC-1 and ER
collaborate to promote hormone-independent breast cancer cell growth and survival remains to be established. As discussed above, DBC-1 could directly stabilize a pool of unliganded ER
dedicated to these functions. Whether or not DBC-1 additionally directly participates in ER
-regulated cell growth and survival processes is presently unknown. An intriguing possibility is that DBC-1 might function to mediate crosstalk between ER
and the NF-
B survival pathway. Emerging evidence indicates that bidirectional molecular crosstalk between the ER
and NF-
B pathway contributes to hormone-independent breast cancer cell growth and the development of antiestrogen resistance (36, 37, 38, 39, 40). Previously, DBC-1 has been linked physically to the NF-
B pathway through a demonstrated interaction with I
B kinase ß (24), although our findings herein link DBC-1 physically and functionally to ER
. Possibly, DBC-1 could thus serve to stabilize and channel ER
toward functional interactions with the NF-
B pathway. Future studies will be required to establish whether and how DBC-1-mediated crosstalk between the ER
and NF-
B signaling pathways might contribute to hormone-independent breast cancer cell growth and survival.
Finally, our finding that ER
and DBC-1 collaborate to suppress apoptosis and promote hormone-independent breast cancer cell growth could have implications for breast cancer prognosis and/or treatment. It is generally believed that a balance between proliferation and apoptosis influences the response of breast tumors to hormonal therapy, and dysregulation of apoptotic signaling pathways has been suggested as a possible basis for treatment failure (29, 30, 41, 42). Accordingly, alterations in DBC-1 expression and/or activity could tip the balance between breast cancer cell growth and death; if so, DBC-1 could represent a novel biomarker of breast tumor response to endocrine therapy. In this regard, no published data currently exists concerning the relationship between DBC-1 and clinical response of breast tumors to endocrine therapy. Nonetheless, it would be useful to know whether overexpression or amplification of DBC-1 is linked to treatment failure. Furthermore, although DBC-1 is not deleted in most breast cancers, it would be of interest to know the hormone receptor and endocrine response status of the relatively small percentage of breast cancers that do harbor DBC-1 deletions. For example, might ER-positive patients carrying DBC-1 deletions be underrepresented among the patient pool refractory to endocrine therapy? Answers to these and related questions should help to clarify the possible role of DBC-1 as a predictor of breast tumor response to endocrine therapy. From a possible therapeutic perspective, disruption of the DBC-1/ER
interface might provide a targeted means to reduce in breast tumors the number of hormone-refractory cells that arise through selection in response to prolonged endocrine treatment. Future experiments will be required to validate this hypothesis and further investigate the full spectrum of ER
-dependent and ER
-independent biological activities linked to DBC-1.
| MATERIALS AND METHODS |
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was constructed by subcloning a BamHI-BamHI fragment carrying the full-length coding region of ER
cDNA from pG/ER(G) (provided by Dr. Dider Picard, University of Geneva, Geneva, Switzerland) (43) into pCS2+ (44). pACT-ER
was constructed by subcloning a BamHI-BamHI fragment carrying the full-length coding region of ER
cDNA from pCS2+-ER
into the pACT VP16 fusion vector (Promega, Madison, WI). GST-ER
(1184), GST-ER
(185250), GST-ER
(251301), and GST-ER
(302595) were gifts from Dr. Yi-Jun Zhu (Northwestern University, Evanston, IL) (45). GST-ER
(1595) was generated by amplifying ER
by PCR and inserting it into the EcoRI site of pGEX-4T-3 vector (GE Healthcare, Little Chalfont, UK). pSport1-DBC-1 was a clone obtained from RZPD Deutsches Ressourcenzentrum für Genomforschung (www.rzpd.de) (RZPD clone DKFZp761O0817Q; KIAA1967). pCS2+DBC-1 was constructed by first amplifying the amino-terminal half of DBC-1 by PCR and inserting it into the ClaI/EcoRI site of pCS2+.His6.FLAG, which yielded pCS2+.His6.FLAG-5'DBC-1.SphI. The carboxyl-terminal half of DBC-1 was amplified by PCR and then inserted into the SphI/EcoRI site of pCS2+.His6.FLAG-5'DBC-1.SphI to yield pCS2+DBC-1, which contains a STOP codon between the DBC-1 coding sequence and the His6.FLAG fusion. This construct was confirmed by sequencing. pCS2+.His6.FLAG-DBC-1 was generated by amplifying the carboxyl-terminal half of DBC-1 by PCR and then inserting it into the SphI/EcoRI site of pCS2+.His6.FLAG-5'DBC-1.SphI to create a version of DBC-1 fused to C-terminal 6XHis and FLAG tags. pCS2+-DBC-1 amino-terminal fragments (1478, 1300, 1230, 1200, 1150, and 150478) were generated by amplifying fragments by PCR and inserting them into the EcoRI/XhoI site of pCS2+. pCS2+-DBC-1 (479923) was generated by amplifying the carboxyl-terminal half of DBC-1 by PCR and inserting it into the EcoRI/XhoI site of pCS2+. pBIND-DBC1 (1478) was constructed by amplifying the amino-terminal half of DBC-1 by PCR and inserting it into the SalI/XbaI site of the pBIND GAL4 fusion vector (Promega). pBIND-DBC1 (479923) was constructed by amplifying the carboxyl-terminal half of DBC-1 by PCR and inserting it into the XbaI/NotI site of pBIND. pBIND-DBC-1 was constructed by subcloning an XbaI/NotI carboxyl-terminal fragment of DBC-1 from pBIND-DBC1 (479923) into pBIND-DBC1 (1478).
Reporter Plasmids
pG5luc, carrying five GAL4 DNA-binding sites upstream of the major late promoter of adenovirus driving expression of the firefly luciferase gene, was purchased from Promega.
Cell Lines and Culture Conditions
The HeLa (American Type Culture Collection, Manassas, VA), T-47D (American Type Culture Collection), MCF-7 (American Type Culture Collection), AmphoPack 293 (Clontech, Mountain View, CA), and MDA-MB-231 (American Type Culture Collection) cells were routinely cultured in DMEM (Invitrogen, Carlsbad, CA) supplemented with 10% fetal bovine serum (FBS) (Hyclone, Logan, UT) and penicillin-streptomycin-L-glutamine (Invitrogen). BG-1 cells, from Dr. Kenneth S. Korach (National Institute of Environmental Health Sciences, Research Triangle Park, NC) (46), were routinely cultured in DMEM/F12 (Invitrogen) supplemented as listed above. All cell lines except BG-1 and MDA-MB-231 cells were cultured at 37 C in a 10% CO2 humidified chamber; BG-1 and MDA-MB-231 cells were cultured at 5% CO2.
GST Pull-Down Assays
GST and GST fusion proteins were expressed in and purified from BL21-CodonPlus(DE3)-RIPL Escherichia coli (Stratagene, La Jolla, CA). Cells were grown at 37 C to A600 of 1.0, and then isopropyl-1-thio-ß-D-galactopyranoside was added to a final concentration of 0.5 mM. For GST, GST-ER
(1184), GST-ER
(185250), and GST-ER
(251301), the cells were grown at 30 C for another 5 h. For GST-ER
(302595), the cells were grown at 20 C for another 5 h. For GST-ER
(1595), the cells were grown at 16 C for another 5 h. Cells were pelleted, washed once with PBS, and resuspended in lysis 250 buffer [50 mM Tris-HCl, 250 mM NaCl, 5 mM EDTA, and 0.1% Nonidet P-40 (NP-40)] supplemented with protease inhibitors (20 µM antipain, 2 µM pepstatin, 20 µM leupeptin, and 2 µg/ml aprotinin). Resuspended cells were subjected to one round of freeze-thaw, followed by sonication and clarification by centrifugation at 35,000 x g for 30 min at 4 C.
Clarified GST lysates were bound to glutathione-Sepharose beads (GE Healthcare) for 45 min at 25 C, followed by washing four times for 5 min each with lysis 250 buffer containing 0.2% BSA and protease inhibitors. DBC-1 or fragments of DBC-1 were labeled with [35S]methionine (TNT SP6 quick-coupled transcription/translation system; Promega) and incubated with immobilized GST proteins in PD buffer (50 mM Tris-HCl, 200 mM KCl, 5 mM MgCl2, 5 mM EDTA, and 0.05% NP-40) for 2 h at 4 C. Binding reactions were washed with PD buffer three times for 5 min each at 4 C and subsequently boiled in 20 µl of 1x Laemmlis sample buffer. Eluates were resolved by SDS-12% PAGE and visualized by PhosphorImager analysis (GE Healthcare).
Mammalian Two-Hybrid Interaction Analysis
HeLa cells grown under hormone-free conditions for 2 d were plated at 1 x 105 cells per well in 12-well plates (Dow Corning, Corning, NY). After 24 h, the cells were transfected using FuGENE 6 (Roche, Indianapolis, IN) according to the recommendations of the manufacturer. In defining the ER
-DBC-1 interaction, transfection mixtures consisted of pCH110 (47), an internal control plasmid, expressing ß-galactosidase under control of the simian virus 40 promoter (167 ng), pG5luc reporter (167 ng), pACT-ER
(334 ng), and the various pBIND-DBC-1 constructs (334 ng), including pBIND-DBC-1, pBIND-DBC-1 (1478), and pBIND-DBC-1 (479923). pBIND empty vector was used as an appropriate control for interaction with pACT-ER
. pACT empty vector was used as an appropriate control for interaction with the various pBIND-DBC-1 constructs. After 48 h, cells were harvested and assayed for luciferase activity according to the guidelines of the manufacturer (Promega). Luciferase activity was corrected for the corresponding ß-galactosidase activity to give relative activity. ß-Galactosidase activity was assayed according to the instructions of the manufacturer (Tropix, Bedford, MA). Transfections were repeated a minimum of three times in duplicate. For experiments with ligand treatment, E2 (Sigma, St. Louis, MO) was added to cells at 107 M for 24 h before harvest.
For Western blot analysis, 48 h after transfection, whole-cell lysates were prepared in radioimmunoprecipitation assay buffer (50 mM Tris-HCl, 150 mM NaCl, 0.5% deoxycholate, 1% NP-40, and 0.1% SDS) supplemented with protease inhibitors and clarified by centrifugation. Equivalent amounts of lysates were boiled in Laemmlis sample buffer and resolved by SDS-10% PAGE. Proteins were analyzed by immunoblot using antibodies against GAL4-DBD (RK5C1; Santa Cruz Biotechnology, Santa Cruz, CA) and ER
(HC-20; Santa Cruz Biotechnology).
Coimmunoprecipitations
T-47D, MCF-7, or BG-1 cells were grown under hormone-free conditions for 3 d and treated without or with E2 (107 M), 4-hydroxytamoxifen (106 M; Sigma), or ICI 182,780 (107 M; Tocris, Ellisville, MO) for 1 h before cell harvest and coimmunoprecipitation. Whole-cell lysates were prepared in 0.5% NP-40 lysis buffer (50 mM Tris-HCl, 150 mM NaCl, 5 mM EDTA, and 0.5% NP-40) supplemented with protease inhibitors and clarified by centrifugation. Nuclear and cytoplasmic extracts were prepared as described previously (48). Lysates were adjusted to binding buffer (50 mM Tris-HCl, 175 mM NaCl, 5 mM EDTA, 0.2% NP-40, and 10% glycerol, supplemented with protease inhibitors) concentration. Lysates were then subjected to immunoprecipitation with rabbit polyclonal anti-ER
(HC-20; Santa Cruz Biotechnology) antibody or mouse polyclonal anti-DBC-1 antibody [produced in our laboratory against recombinant DBC-1 (amino acids 475923)] and protein A-Sepharose beads. Immune complexes were washed three times with binding buffer, boiled in Laemmlis sample buffer, and resolved by SDS-10% PAGE. Proteins were transferred to nitrocellulose membranes and visualized by using antibodies against DBC-1, ER
, HSP90 (rabbit polyclonal; Genetex, San Antonio, TX), CYP40 (rabbit polyclonal; Abcam, Cambridge, MA), appropriate peroxidase-conjugated secondary antibodies (Bio-Rad, Hercules, CA), and enhanced chemiluminescence detection (GE Healthcare).
DBC-1 Silencing by siRNA
To selectively knock down the expression of endogenous DBC-1 protein, an siRNA pool consisting for four different target sequences was used (catalog no. 010427; Dharmacon, Chicago, IL). These RNA duplexes (3 µg per 2 x 106 cells), as well as a negative control duplex that does not pair with any human mRNA (Dharmacon), were electroporated in MCF-7 or MDA-MB-231 cells using the cell line Nucleofector kit V (Amaxa, Gaithersburg, MD). Immediately after control or DBC-1 siRNA electroporation, cells were seeded at a concentration of 1 x 106 per 60 mm plate. In all experiments, cells were allowed to grow for 3 d in phenol-red-free medium supplemented with 10% charcoal/dextran-treated FBS and without or with indicated chemical treatments. Cells were harvested 3 d after electroporation.
Western Blot Analysis
Three days after electroporation, whole-cell lysates were prepared in radioimmunoprecipitation assay buffer (50 mM Tris-HCl, 150 mM NaCl, 0.5% deoxycholate, 1% NP-40, and 0.1% SDS) supplemented with protease inhibitors and clarified by centrifugation. Lysates were boiled in Laemmlis sample buffer and resolved by SDS-10% PAGE. Proteins were analyzed by immunoblot using antibodies against DBC-1 (produced in our laboratory), ER
(HC-20; Santa Cruz Biotechnology), and TFIIEß (C-21; Santa Cruz Biotechnology) as described previously. Quantification of Western blots was performed using the Kodak ImageStation 2000R (Eastman Kodak, Rochester, NY).
Quantitative Real-Time RT-PCR
Three days after electroporation, RNA was isolated from cells using TRIzol reagent (Invitrogen). RNA was reverse transcribed using random hexamers and Superscript III (Invitrogen) following the instructions of the manufacturer. Quantitative RT-PCR was performed using ABsolute SYBR Green ROX Mix (ABgene, Rochester, NY) on an ABI PRISM 7900HT Fast real-time PCR system (Applied Biosystems, Foster City, CA). The gene-specific primers used were as follows: DBC-1, 5'-ATG TCC CAG TTT AAG CGC CAG-3' and 5'-CAA CCC CAA AGT AGT CAT GCA A-3'; ER
, 5'-CCA CCA ACC AGT GCA CCA TT-3' and 5'-GGT CTT TTC GTA TCC CAC CTT TC-3'; and glyceraldehyde-3-phosphate dehydrogenase (GAPDH), 5'-CCT GTT CGA CAG TCA GCC G-3' and 5'-CGA CCA AAT CCG TTG ACT CC-3'.
Proliferation Assays
Three days before electroporation, cells were grown in phenol-red-free medium supplemented with 10% charcoal/dextran-treated FBS. Immediately after control or DBC-1 siRNA electroporation, cells were seeded at a concentration of 10 x 104 per well in six-well plates. In all experiments, triplicates of cells were allowed to grow for 7 d in phenol-red-free medium supplemented with 10% charcoal/dextran-treated FBS and without or with E2 (107 M) at 37 C and 10% CO2. Cell viability was determined using the trypan blue exclusion assay, and viable cells were counted with the use of a hemacytometer. Proliferation assays were repeated a minimum of three times.
Apoptosis Assays
Three days before electroporation, cells were grown in phenol-red-free medium supplemented with 10% charcoal/dextran-treated FBS. Immediately after control or DBC-1 siRNA electroporation, cells were seeded at a concentration of 1 x 106 per 60 mm plate. In all experiments, cells were allowed to grow for 3 d in phenol-red-free medium supplemented with 10% charcoal/dextran-treated FBS and without or with E2 (107 M), ICI 182,780 (107 M; Tocris), or a combination of the two at 37 C and 10% CO2. Seventy-two hours after electroporation, trypsinized cells (1 x 105) were stained with Annexin V-fluorescein isothiocyanate (FITC) (BD Pharmingen, San Diego, CA) and propidium iodide (Becton Dickinson, Franklin Lakes, NJ) according to the instructions of the manufacturer. Flow-cytometric analyses to quantify apoptosis were done in an FACSCalibur (Becton Dickinson). All Annexin V-FITC-positive cells were considered apoptotic. Apoptosis assays were repeated a minimum of three times.
Data Analysis
Statistical significance was assessed by comparing mean ± SD values with Students t test for independent groups. P
0.05 was considered statistically significant.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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Disclosure Summary: The authors have nothing to disclose.
First Published Online May 1, 2007
Abbreviations: CYP40, Cyclophilin 40; E2, 17-ß-estradiol; ER, estrogen receptor; FBS, fetal bovine serum; FITC, fluorescein isothiocyanate; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; GST, glutathione S-transferase; HSP90, heat shock protein 90; NF-
B, nuclear factor
B; NP-40, Nonidet P-40; RNAi, RNA interference; siRNA, small interfering RNA.
Received for publication January 31, 2007. Accepted for publication April 27, 2007.
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