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Department of Pharmacology and Cancer Biology (C.D.D., D.P.M.), Duke University Medical Center, Durham, North Carolina 27710; and Department of Pharmacology and Howard Hughes Medical Institute (M.U., D.J.M.) and Department of Pediatrics (P.W.S.), University of Texas Southwestern Medical Center, Dallas, Texas 75390
Address all correspondence and requests for reprints to: Donald P. McDonnell, Ph.D., Duke University Medical Center, Pharmacology and Cancer Biology, Box 3813, Durham, North Carolina 27710. E-mail: donald.mcdonnell{at}duke.edu.
| ABSTRACT |
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and ERβ, distinguishing it from E2 and other SERMs. Thus, as with other ER ligands, it appears that the unique pharmacological activity of 27HC relates to its ability to impact ER structure and modulate cofactor recruitment. Cumulatively, these data indicate that 27HC is an endogenous SERM with partial agonist activity in breast cancer cells and suggest that it may influence the pathology of breast cancer. Moreover, given the product-precursor relationship between 27HC and cholesterol, our findings have implications with respect to breast cancer risk in obese/hypercholesteremic individuals. | INTRODUCTION |
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and β) that differ in terms of their expression patterns, ligand binding preferences, and biological activities (1, 2, 3). Although specific biological responses have been attributed to agonist-activated ER
or ERβ, it is also clear that in cells where both receptors are expressed, ERβ functions to dampen ER
transcriptional activity (4). Thus, the pharmacological response of target cells to estrogens and antiestrogens represents the composite activities of both receptors acting as homodimeric or heterodimeric complexes.
Among the endogenous estrogens, 17β-estradiol (E2) is the most potent and functions as a ligand for both ER
and ERβ (5). However, in postmenopausal women, estrone (E1) and estriol (E3) are also likely to be important ER ligands. Besides differences in their pharmacokinetic properties, it is generally considered that the mechanism of action of these endogenous estrogens is similar. This result is in contrast to what has emerged from studies aimed at developing new classes of ER agonists and antagonists. From these efforts have emerged the selective ER modulators (SERMs), compounds whose relative agonist/antagonist activities are manifest in a cell- and promoter-selective manner. The molecular basis of SERM activity is now well established and has been attributed to the ability of these molecules to induce different changes in receptor architecture, an event that engenders the recruitment of functionally distinct cofactors. Until recently, it was not anticipated that there were any endogenous molecules with SERM-like activity. However, the recent observation that the oxysterol 27-hydroxycholesterol (27HC) is a bona fide ER ligand that displays partial agonist activity in the vasculature of ovariectomized mice has raised the possibility that the SERM concept may extend to endogenous ligands (6).
Oxysterols are hydroxylated metabolites of cholesterol that have been previously described as ligands for nuclear receptors, most notably for liver X receptor (LXR) (7). These molecules are produced in many cell types as primary and secondary metabolites of cholesterol. Outside the liver, cholesterol can be hydroxylated via the acidic bile acid synthesis pathway, a process that is initiated by the cytochrome P450 enzyme CYP27A1 (8). This enzyme catalyzes the conversion of cholesterol to 27HC, the principal endogenous oxysterol (Fig. 1
), which can then be further metabolized by CYP7B1 into more polar bile acid intermediates (9). Of interest to us was the observation that oxysterol concentrations are particularly high in the vasculature, where the role of ER has been well established (10, 11, 12, 13). In the cardiovascular system, both macrophages and endothelial cells express CYP27A1 and can convert cholesterol to 27HC. This is particularly evident in atherosclerotic lesions where resident macrophages exist. It is not surprising, therefore, given its ability to bind ER, that 27HC has estrogenic activities in the vasculature (6).
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| RESULTS |
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Transcriptional Activity
. For the initial studies, we elected to measure the transcriptional response of this ligand on a classic estrogen response element (ERE) using a well-defined system of transfected receptor and reporter in ER-negative mammalian cell lines. In this experiment, HeLa cells were transiently transfected with ER
and an ERE-luciferase (3XERE-TATA-Luc) reporter. As observed in Fig. 2
in a dose-dependent manner. Notably, the maximal transcriptional activity of ER
in the presence of 27HC did not reach that induced by E2. The dose-response curve is shifted to the right, reflecting the difference in affinity of this compound for ER
(27HC Ki = 1.32 µM, E2 Kd = 0.1 nM) (2, 6). Similar results were obtained with ERβ, and the findings were reconfirmed in both CV-1 and HepG2 cells, two additional ER-negative mammalian cell lines (data not shown). The concentration range at which 27HC activates ER
transcriptional activity is physiologically relevant, because the circulating concentration of 27HC ranges from 0.15–0.73 µM in a healthy individual, and can reach a local concentration in the millimolar range within atherosclerotic plaques in an individual with severe cardiovascular disease (6, 9). In addition, 27HC levels in the mouse aorta were found to be 0.25–0.6 µM in the absence of disease, and notably over 30% of this 27HC was unesterified (6). Interestingly, the Km of 27HC for its catabolic enzyme, CYP7B1, is 24 µM, which is significantly higher than that required to saturate ER
(6). Knowing that 27HC can effectively compete with E2 for binding to ER
at physiological concentrations in an in vitro binding assay (6), we next evaluated its ability to antagonize activation by E2. At a physiologically relevant E2 concentration (0.5 nM), increasing concentrations of 27HC reduced the E2-induced transcriptional activity of ER
(Fig. 2
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in the presence of E2, the SERM 4-hydroxy-tamoxifen (4OHT), or the pure antiestrogen ICI 182,780 (ICI) (16, 17, 18). Therefore, we used these previously identified peptides to see whether the conformation of ER
induced by 27HC shared any similarities with those induced by other ligands. To this end, we analyzed by mammalian two-hybrid assay the interaction of ER
with this set of peptides in the presence of vehicle, 27HC, E2, 4OHT, or ICI. In this assay, ER
was fused to the VP16 transactivation domain, and the peptides were linked to the yeast Gal4 DNA-binding domain (Gal4DBD). Interaction between the receptor and peptide was assessed by measuring the transcriptional readout of a 5XGal4Luc3 luciferase reporter. This analysis revealed that the D30 peptide binds only pure agonist-activated ER
, bT1 binds ER
in the presence of 4OHT, and bI2 binds the receptor in the presence of ICI (16, 17). As shown in Fig. 3A
, indicating that it induces a more agonist-like receptor conformation. 27HC-bound ER
does not adopt a conformation conducive to binding of bT1 or bI2, confirming our expectations that the conformational change induced by 27HC is similar to E2 and distinct from 4OHT or ICI.
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structure and how this differs from E2-activated receptor. For this study, we screened a peptide library containing the LxxLL motif found in nuclear receptor (NR) coactivators (19). Additionally, because 27HC did not exhibit full agonist activity, we also screened a peptide library containing the CoRNR box motif characteristic of corepressor proteins (20, 21). Using a modified M13 phage display screen (16), we isolated peptides from both libraries that interacted with 27HC-bound ER
and classified these interacting peptides based on the ligands that elicited an interaction with ER
. The binding profile of representative peptides is shown in Fig. 3B
bound by either 27HC or E2, with varying degrees of selectivity for 27HC over E2. Some peptides interacted equally well with the receptor conformation induced by 27HC or E2 (CDD.64). Importantly, we also identified peptides that preferred the conformation of ER
in the presence of 27HC vs. E2 (CDD.11 and CDD.30) and were intrigued by the finding that this group consisted of peptides containing either an LxxLL or a CoRNR box motif. Interestingly, we also found peptides that bind preferentially to 27HC- and 4OHT-bound ER
but not E2-bound ER
(CDD.29). The sequence of this peptide contains the CoRNR box motif found in corepressors. It is known that 4OHT-bound ER
recruits corepressor proteins, a key element of its ability to manifest antagonist activity. We concluded from these peptide binding studies that 27HC-bound ER
undergoes a conformational change that may allow for the recruitment of both coactivator and corepressor peptides and confirms that 27HC induces a unique active conformation of ER
. This may explain the partial agonist/SERM activity of this oxysterol.
27HC-Bound ER
Recruits Coactivator Peptides
In the presence of E2, the conformational change in ER
allows for the recruitment of peptides containing the NR interaction motifs found within coactivators such as steroid receptor coactivator 1 (SRC1), activating signal cointegrator-2 (ASC2), amplified-in-breast cancer 1 (AIB1), and glucocorticoid receptor interacting protein 1 (GRIP1) (16). We therefore investigated whether the conformational change induced by 27HC also allows for the recruitment of these coactivator peptides. In cells transfected with VP16-ER
, coactivator peptides fused to Gal4DBD, and a 5XGal4Luc3 luciferase reporter, treatment with E2 or 27HC, but not 4OHT, led to recruitment of SRC1-NR, ASC2-NR, AIB1-NR, and GRIP1-NR to ER
(Fig. 3D
). These data provided additional support for the idea that 27HC is indeed an estrogen capable of inducing an active activation function-2 (AF-2) conformation and is likely to be a physiologically relevant estrogen in some contexts.
27HC Treatment Increases ER
Occupancy at the pS2 Promoter
Although we have shown that 27HC, like E2, regulates ER
transcriptional activity, we sought to determine whether activation by 27HC allows the recruitment of ER
to DNA elements analogous to that seen with E2. Therefore, we performed chromatin immunoprecipitation in MCF7 cells to analyze ER
recruitment to the well-characterized pS2 promoter. Treatment for 45 min with E2 or 27HC led to a significant recruitment of ER
to the ERE-containing region of the pS2 promoter (Fig. 4
) and not to a distal non-estrogen-responsive DNA region as a negative control (data not shown).
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-Target Gene Expression in MCF7 and T47D Breast Cancer Cells
to DNA response elements, we sought to determine whether 27HC acts as an agonist in ER
-positive breast cancer cell lines. Using the ER
-positive MCF7 human breast cancer cell line, we analyzed by quantitative RT-PCR (qRT-PCR) the ability of 27HC to regulate ER
-target gene expression. Increasing concentrations of 27HC led to target gene regulation similar to treatment with increasing concentrations of E2, albeit with lower efficacy in some cases, a reflection of its partial agonist activity (Fig. 5A
-target gene expression occurred at physiological concentrations of 27HC (0.5–1 µM).
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is able to regulate gene expression in a direct manner through its interaction with an ERE and by indirect mechanisms through interactions with Fos and Jun at AP1 elements and with Sp1 at GC-rich motifs (22, 23). Given that the SERM 4OHT is able to activate transcription of ER
-target genes under control of an AP1 element but not those under control of an ERE (24), we asked whether 27HC exhibited any selectivity with respect to the expression of genes using these two modes of ER-mediated transcriptional regulation. Interestingly, we found that 27HC regulated target gene expression at 1) classical EREs pS2 (trefoil factor 1) and WISP2 (WNT1-inducible signaling pathway protein 2), 2) AP1 elements ERBB4 (v-erb-a erythroblastic leukemia viral oncogene homolog 4) and PR (progesterone receptor), and 3) Sp1 sites PR and E2F1 (E2F transcription factor 1) (Fig. 5A
, 27HC most closely resembled E2.
In addition to gene expression, we also analyzed the expression of progesterone receptor (PR) protein, a robust surrogate marker for ER activation. As expected, there was an increase in PR protein beginning at 4 h and increasing through 24 h upon treatment with E2 (Fig. 5B
). A similar pattern was observed when the cells were treated with 27HC, albeit with a slight temporal delay. As a control, treatment with 4OHT did not affect PR protein expression.
Although the most studied ER
transcriptional targets are up-regulated by treatment with E2, many genes important for growth, differentiation, and signaling are down-regulated upon treatment with E2. These include the growth factor receptor ERBB4, IL1-R1, SMAD3, and Id2 (31). Importantly, these E2 down-regulated genes underwent a similar decrease in transcript level upon treatment with 27HC (Fig. 5A
and data not shown), although the kinetics were not identical to that observed in E2-treated cells. It appeared that 27HC may be more active in down-regulating than in up-regulating ER
-target genes, which was not surprising considering the 27HC-ER
complex recruited peptides containing the CoRNR box motif found in corepressors more efficiently than E2-ER
. Similar transcriptional responses were observed in E2- or 27HC-treated T47D breast cancer cells (Fig. 5C
). We also demonstrated in both cell lines that target gene induction by E2 and 27HC was abrogated by cotreatment with the pure antagonist ICI (Fig. 6
and data not shown). Cumulatively, these data confirm that 27HC is working through ER
in these breast cancer cell lines and that pharmacologically, it closely resembles E2.
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Protein Degradation
agonists is their ability to induce receptor turnover. Treatment with E2 leads to ER
degradation, an event that is linked to transcriptional activity (32, 33, 34). Therefore, we evaluated the ability of 27HC to regulate ER
turnover. In MCF7 cells, we determined that treatment with 27HC led to a decrease in ER
protein levels over 24 h (Fig. 7A
protein remaining is depicted in Fig. 7B
as robustly as E2, most likely reflecting the partial agonist activity of 27HC.
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degradation but not for ICI-mediated degradation (35). Therefore, we investigated the importance of AIB1 in 27HC-induced ER
degradation. Using small interfering RNA (siRNA) technology, we knocked down AIB1 expression and analyzed ER
protein levels after 8 h of ligand treatment (Fig. 7C
degradation, suggesting that the mechanisms of E2- and 27HC-induced ER
turnover are likely very similar.
MCF7 Cells Proliferate in Response to 27HC
Treatment of ER
-positive breast cells with E2 leads to the induction of Cyclin D1 expression and a subsequent increase in the number of cells in S-phase (36). Using qRT-PCR, we show that, similar to E2, 24 h of 27HC treatment led to a robust induction in Cyclin D1 expression (Fig. 8A
). Not surprisingly, we also demonstrated that, like E2, 27HC increased the number of cells cycling through S-phase (Fig. 8B
). Because 27HC acted as an ER
partial agonist, we hypothesized that the same behavior would be observed in a bromodeoxyuridine (BrdU) labeling assay. As shown in Fig. 8B
, cotreatment of cells with 27HC and E2 led to a dose-dependent decrease in BrdU incorporation to a level that represented the maximal activity of 27HC. Finally, we determined that treatment over 6 d with either E2 or 27HC led to a dose-dependent increase in cell number compared with vehicle (Fig. 8C
). Furthermore, increasing concentrations of 27HC suppressed E2-mediated proliferation, an activity reflecting its partial agonist activity. We conclude therefore that the partial agonist activity of 27HC observed at the level of gene expression is also manifest at the level of cell proliferation.
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| DISCUSSION |
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, as seen in both exogenous reporter assays and in qRT-PCR analysis of target gene expression. Additionally, both 27HC and E2 induce recruitment of ER
to DNA response elements and trigger ligand-mediated receptor degradation, an event that is dependent on AIB1. Of specific importance was the observation that 27HC, like E2, induces the proliferation of ER
-positive breast cancer cells in vitro. In all these instances, however, 27HC does not exhibit full agonist activity but rather displays classic partial agonist behavior. This is readily apparent in both transcription and proliferation assays where 27HC can antagonize the E2-induced activation of ER
. The fact that 27HC has similar, yet distinct, behavior from E2 is highlighted by the apparent differences in the structure of the ER
-E2 and ER
-27HC complexes as seen in the peptide-binding studies. Specifically, we were able to show using these peptide-binding studies that 27HC-activated ER
adopts a structure that shares features in common with both E2- and 4OHT-activated ER
. Thus we believe that our findings support the idea that 27HC is similar in function to, yet distinct from, E2 in its ability to regulate ER activity in a variety of validated models of estrogen action and that its overall activity is consistent with it being classified as a SERM. We plan to investigate whether oxysterols other than 27HC have similar actions in terms of ER regulation.
We were intrigued by the apparent tissue-specific action of 27HC, given our finding that 27HC has agonist activity in breast cancer cells and the previous observation that it manifests antagonistic activity in the cardiovascular system. Tissue-specific agonist and antagonist actions are classically thought to arise from differential cofactor expression; therefore, it will be interesting to compare the cofactor preferences of 27HC-bound ER
in the breast vs. the vasculature. The fact that we were able to identify peptides that interacted in a highly specific manner with ER
in the presence of 27HC suggests that there are distinct protein-protein interaction surfaces presented on ER
in the presence of this ligand. Defining how this influences the differential recruitment of cofactors is an area of investigation that is currently underway.
27HC as an Endogenous ER
Ligand
In the past, our laboratory and others have generated ER-indicator mice wherein ERE-β-galactosidase or ERE-luciferase reporters are introduced transgenically (37, 38, 39). In these mice, it was reported that there was a significant level of E2-independent activation of ER-reporter activity that was blocked by treatment with ICI (37, 38). This basal activity is currently attributed to ligand-independent activation of ER. However, it is interesting to speculate that the presence of 27HC, or a similar oxysterol, may be responsible for this basal ER-reporter activity, a hypothesis that could be tested by administration of specific CYP27A1 inhibitors (40) or by crossing the CYP27A1 knockout mouse with these ER-indicator mice and examining whether the basal activity is eliminated. These studies are currently planned in our laboratory.
Biological Significance of 27HC Action in Inflammation and Breast Cancer
In the breast, and specifically in breast cancer, E2 is a mitogen through its actions on ER
(41, 42, 43). We demonstrate that 27HC induces proliferation of ER
-positive breast cancer cells and that this proliferation correlates with increased Cyclin D1 expression and accumulation of cells in the S-phase of the cell cycle. This finding has important implications with respect to the treatment of ER
-positive breast cancers, particularly those treated with aromatase inhibitors. Although these therapies are extremely successful, resistance by an as yet unknown means is a significant clinical issue (44). Given that many of these tumors with acquired resistance continue to rely on ER
, we suggest that the ability of 27HC to regulate proliferation may be a contributing factor. In this way, 27HC may act as an alternate estrogenic ligand that manifests its agonist behavior in a low-estrogen environment.
We examined microarray data from human breast tumor samples and found a trend between CYP7B1 expression and disease-free survival. Among those patients with ER
-positive breast tumors, increased expression of CYP7B1 was associated with an increase in disease-free survival. No such correlation was observed in patients with ER
-negative breast tumors. These findings support our hypothesis that 27HC plays an important role in the development and/or progression of ER
-positive breast cancer. Specifically, CYP7B1 metabolizes 27HC such that increased expression of CYP7B1 would facilitate the conversion of 27HC to downstream products, lowering local concentrations of 27HC. It would be anticipated, therefore, that ER
-positive breast tumors with lower CYP7B1 expression, and therefore higher 27HC levels, would have a growth advantage over those with lower expression, especially in situations of low estrogen.
Interestingly, macrophages exhibit a very high capacity to produce 27HC. This is interesting in light of the observation that an increased number of tumor-infiltrating macrophages is an independent risk factor for reduced survival for breast cancer patients (14). Many hypotheses exist as to how tumor-infiltrating macrophages are co-opted to enter the tumor microenvironment and how they increase tumorigenic behavior (45, 46, 47). However, a potential explanation stemming from our findings is that increased macrophage presence in breast tumors elevates the local 27HC concentration and subsequently the activation of ER. Although estrogens have an established role in modulating the inflammatory response through repression of cytokine production in macrophages (48), their primary contribution in the etiology of breast cancer is considered to be their ability to function as mitogens. Thus, we hypothesize that the primary action of 27HC in the context of breast cancer is to induce cell proliferation through activation of ER.
There is an increased risk for breast cancer in obese individuals (49, 50) that has been linked to increased aromatase activity and resultant estrogen production in adipose tissue (51, 52). In a healthy individual, 27HC levels decline alongside estrogen levels during menopause (53). However, circulating levels of 27HC correlate well with cholesterol levels, and obesity often coincides with increased cholesterol levels (54). Thus, this increased level of 27HC in an obese postmenopausal woman may also contribute to the development of breast cancer through the potential mitogenic actions of 27HC in the breast.
The fact that macrophages, epithelial cells, and endothelial cells produce 27HC, which can exit the cell and enter the systemic circulation, raises the possibility that 27HC has a more global function in regulating the activity of ER
and ERβ than just acting as a partial agonist in the breast and the cardiovascular system. ER
and ERβ are expressed in many other tissues, including the liver, bone, lung, and reproductive tract. How 27HC functions to regulate ER activity in these tissues, both in the presence of high estrogen in a premenopausal female and in a low-estrogen environment, remains to be evaluated.
| MATERIALS AND METHODS |
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Plasmids
pcDNA3.1nv5-ER
is a cytomegalovirus (CMV)-driven expression plasmid containing amino acids 1–595 of human ER
with an N-terminal v5 tag. It was constructed by PCR subcloning full-length ER
from pVP16-ER
(16) and entered into pENTR-TOPO (Invitrogen) to create pENTR-TOPO-ER
, which by LR reaction (recombination between attL and attR sites) into pCDNA3.1nv5-DEST (Invitrogen) yielded pCDNA3.1nv5-ER
. A plasmid expressing ER
as a fusion to the yeast VP16 transactivation domain was used in mammalian two-hybrid assays (pVP16-ER
) and has been previously described (16). The bait peptides are expressed as fusions to the Gal4DBD. GRIP1-NR, SRC1-NR, and D30 have been previously described (16). bI2 and bT1 were described elsewhere (17). AIB1-NR contains amino acids 621–821 of human AIB1. ASC2-NR contains amino acids 746–917 of human ASC2. These fragments were identified in an unrelated screen performed in our laboratory. The 3XERE-TATA-Luc (55) and the 5XGal4Luc3 (16) reporters have both been previously described.
Mammalian Cell Culture and Transient Transfection Assays
All cell lines were obtained from American Type Culture Collection (Manassas, VA). HeLa (human cervical adenocarcinoma) and HepG2 (human hepatocellular carcinoma) cells were maintained in MEM (Invitrogen) supplemented with 8% fetal bovine serum (Hyclone Laboratories, Logan, UT), 1 mM sodium pyruvate, and 0.1 mM nonessential amino acids (Invitrogen). MCF7 (human breast adenocarcinoma) cells were maintained in DMEM/F12 (Invitrogen) supplemented with 8% fetal bovine serum, 1 mM sodium pyruvate, and 0.1 mM nonessential amino acids. All cell lines were grown in a 37 C incubator with 5% CO2.
HeLa cells were used for transactivation assays. For transient transfections, cells were plated in phenol red-free media containing 8% charcoal-stripped serum (Hyclone), 1 mM sodium pyruvate, and 0.1 mM nonessential amino acids in 24-well plates 24 h before transfection. Lipofectin-mediated (Invitrogen) transfection has been described in detail previously (56). Briefly, a DNA-Lipofectin mixture containing a total of 2 µg plasmid for each triplicate sample was added to the cells. Each triplicate sample contained 0.1 µg pCMV-βgal, 1.5 µg 3XERE-TATA-Luc, 5 ng pCDNA3.1nV5-ER
, and 0.395 µg pCDNA3.1nV5-DEST filler vector. Ligands were added to the cells 24 h after transfection, and cells were assayed after overnight treatment. Luminescence and β-galactosidase activity were measured on a Fusion luminometer (PerkinElmer, Waltham, MA). Results are expressed as normalized luciferase activity (normalized to β-galactosidase for transfection efficiency) for one representative experiment performed in triplicate. Error bars indicate the SEM for the triplicate wells.
HepG2 cells were used for mammalian two-hybrid assays. Cells were plated in 24-well plates 24 h before transfection in phenol red-free media containing 8% charcoal-stripped serum, 1 mM sodium pyruvate, and 0.1 mM nonessential amino acids. A DNA-Lipofectin mixture containing a total of 3 µg plasmid for each triplicate sample was added to the cells, where each triplicate sample contained 0.1 µg pCMV-βgal, 1.5 µg 5XGal4Luc3, 0.4 µg VP16-ER
, and 1 µg pM-peptide. Ligands were added to the cells 24 h after transfection, and cells were assayed after overnight treatment. Luminescence and β-galactosidase activity were measured as above.
RNA Isolation and qRT-PCR
For RNA analysis, MCF7 or T47D cells were seeded in six-well plates in phenol red-free media containing 8% charcoal-stripped serum, 1 mM sodium pyruvate, and 0.1 mM nonessential amino acids. After 48 h, cells were treated with the appropriate ligand. After the indicated time period, cells were harvested and total RNA was isolated using the Aurum Total RNA Mini Kit (Bio-Rad). One microgram of RNA was reverse transcribed using the iScript cDNA synthesis kit (Bio-Rad). The Bio-Rad iCycler Realtime PCR System was used to amplify and quantitate levels of target gene cDNA. qRT-PCR were performed with 1 µl cDNA, 10 µM specific primers (see Table 1
for sequences), and iQ SYBR Green Supermix (Bio-Rad). Data are normalized to the 36B4 housekeeping gene and presented as fold induction over vehicle. Data are the mean ± SEM for triplicate amplification reactions from one representative experiment. Each experiment was repeated at least three independent times with very similar results.
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Western Blotting
MCF7 cells were seeded in six-well plates in phenol red-free media containing 8% charcoal-stripped serum, 1 mM sodium pyruvate, and 0.1 mM nonessential amino acids. For ER
degradation and protein expression studies, cells were treated after 48 h with ligand for the indicated time. For siRNA experiments, cells were plated in the presence of 40 nM siAIB1 or siRNA control (Stealth siRNA; Invitrogen) using DharmaFECT-1 (Dharmacon, Lafayette, CO) as a transfection reagent. After 48 h of protein knockdown, the cells were treated for 8 h with vehicle, 1 nM E2, 10 µM 27HC, 100 nM 4OHT, or 100 nM ICI. In both experiments, whole-cell extracts were isolated using RIPA buffer [50 mM Tris-HCl (pH 7.5), 150 mM NaCl, 0.1% Nonidet P-40 (NP40), 0.5% sodium-deoxycholate, 0.05% SDS, 1 mM EDTA, and 1x protease inhibitor mixture (EMD Chemicals, Inc., San Diego, CA)]. Whole-cell lysate (50 µg) was resolved by SDS-PAGE and transferred to a nitrocellulose membrane. ER
was detected using monoclonal mouse antibody D12, cytokeratin 18 with the mouse monoclonal antibody DC-10, and AIB1 with the goat polyclonal antibody C-20 (all from Santa Cruz Biotechnology, Santa Cruz, CA). PR was detected using the mouse monoclonal antibody PR1294 (a kind gift from Dr. D. P. Edwards, Baylor College of Medicine, Houston, TX). Secondary antibodies were purchased from Bio-Rad. The scanned images of chemiluminescence were quantitated using Image J software.
M13 Phage Screen
The M13 phage panning protocol has been previously described (16). Modifications to the original protocol are as follows. We used 4 pmol recombinant ER
(Affinity BioReagents, Golden, CO). Approximately 107 plaque-forming units of phage libraries were added to each well for the panning process. Four rounds of panning were performed, with PCR being used to recover peptide inserts from the fourth round, which showed significant enrichment of target binding phage. The PCR products were digested with Xho1 and Xba1 for ligation into the expression vector pM5.1 for mammalian two-hybrid assays.
Chromatin Immunoprecipitation
MCF7 cells were grown to 90% confluence in 15-cm dishes in phenol red-free DMEM/F12 supplemented with 8% charcoal-stripped serum, 1 mM sodium pyruvate, and 0.1 mM nonessential amino acids for 3 d, after which the cells were serum starved for 24 h. After treatment with vehicle, 100 nM E2, or 10 µM 27HC for 45 min, the cells were fixed with 1% formaldehyde for 10 min at room temperature. The reaction was stopped with 250 mM glycine by incubation at room temperature for 5 min. Cells were then washed with ice-cold PBS, harvested in ice-cold PBS, and centrifuged for 5 min. The cell pellet was washed twice with ice-cold PBS before being lysed in 1 ml RIPA buffer [50 mM Tris-HCl (pH 7.5), 150 mM NaCl, 0.1% NP40, 0.5% sodium deoxycholate, 0.05% SDS, 1 mM EDTA, and 1x protease inhibitor mixture) by sonication (13 times for 13 sec each at setting 7; Misonix Microson Ultrasonic Cell Disruptor XL), followed by centrifugation for 15 min at 14000 rpm. Supernatants were collected, diluted in RIPA buffer, and immunocleared in 100 µl Protein A/G-PLUS-Agarose beads [50% slurry in 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 200 µg/ml sonicated salmon sperm DNA, and 500 µg/ml BSA] for 30 min at 4 C. Immunoprecipitation was performed for 3 h at 4 C with 10 µg ER
-specific antibody (H-184; Santa Cruz Biotechnology) or 10 µg rabbit IgG control. After immunoprecipitation, 100 µl Protein A/G-PLUS-Agarose beads [50% slurry in 10 mM Tris-HCl (pH 8.0), 1 mM EDTA, 200 µg/ml sonicated salmon sperm DNA, and 500 µg/ml BSA] was added and allowed to incubate overnight at 4 C. Precipitates were sequentially washed twice for 5 min each with the following: buffer A [50 mM HEPES (pH 7.8), 140 mM NaCl, 1 mM EDTA, 1% Triton X-100, 0.1% sodium deoxycholate, 0.1% SDS, and 1x protease inhibitor], buffer B [50 mM HEPES (pH 7.8), 500 mM NaCl, 1 mM EDTA, 1% Triton X-100, 0.1% sodium deoxycholate, 0.1% SDS, and 2x protease inhibitor], buffer C [20 mM Tris-HCl (pH 8.0), 1 mM EDTA, 250 mM LiCl, 0.5% NP40, 0.5% sodium deoxycholate, and 1x protease inhibitor], and Tris-EDTA (10 mM Tris-HCl and 1 mM EDTA). Precipitates were eluted twice in 50 mM Tris-HCl (pH 8.0), 1 mM EDTA, and 1% SDS by incubation at 65 C for 10 min, and then the cross-linking was reversed by addition of 230 mM (final concentration) NaCl and incubation at 65 C overnight. DNA was isolated with a QIAquick PCR Purification kit (QIAGEN, Valencia, CA). qRT-PCR were performed with 1 µl immunoprecipitated DNA, 10 µM specific primers, and iQ SYBRGreen Supermix (Bio-Rad). Data are normalized to the input for the immunoprecipitation.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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Disclosure Summary: The authors have nothing to disclose.
First Published Online September 13, 2007
Abbreviations: AIB1, Amplified-in-breast cancer 1; ASC2, activating signal cointegrator-2; BrdU, bromodeoxyuridine; CMV, cytomegalovirus; E2, 17β-estradiol; ER, estrogen receptor; ERE, estrogen response element; Gal4DBD, Gal4 DNA-binding domain; GRIP1, glucocorticoid receptor interacting protein 1; 27HC, 27-hydroxycholesterol; ICI, ICI 182,780; NP40, Nonidet P-40; NR, nuclear receptor; 4OHT, 4-hydroxy-tamoxifen; PR, progesterone receptor; qRT-PCR, quantitative RT-PCR; siRNA, small interfering RNA; SRC1, steroid receptor coactivator 1.
Received for publication August 7, 2007. Accepted for publication September 4, 2007.
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